Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq31 185 1e-41 seq130 84.2 3e-11 seq39 84.2 3e-11 seq29 84.2 3e-11 >seq31 Length=128647 Score = 185 bits (204), Expect = 1e-41 Identities = 1064/1683 (63%), Gaps = 43/1683 (3%) Strand=Plus/Minus Query 109398 CGCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATG 109457 |||||||| ||| || || |||| ||| || ||||| ||| || ||| | ||| | | | Sbjct 108916 CGCCTTCGTGCGCAGGTAGTACACACCGGTCTTGAGGCCACACTCCCAGGTGTAGAAAAG 108857 Query 109458 CATTGAAGAGAGTTTGGAAAGTG-TCGGACTCTCCATAAACAAGTTCATCGACTGAGACT 109516 ||| || | || | ||| || | | || ||| || |||| ||||| |||||| || | Sbjct 108856 CATCGACGTGA-TCTGGCCAGAGGTGGGGTTCTGCAGGAACAGGTTCAGCGACTGCGATT 108798 Query 109517 GATCGATGAATCGACCACGATCAGCCGCCATGTCGATGA---TACACTTTTGGCTAATTT 109573 | || ||| | |||| || || ||||||||||| | | | || || || | Sbjct 108797 GGTCAATGTACTGACCGCGGTCGCGGGCCATGTCGATCAGCTTGCGCTGAGGG---ATCT 108741 Query 109574 CCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAG 109633 |||| || || ||| | | ||| | || | ||| ||| | |||| || || Sbjct 108740 CCCACACGGTGCGGTAGAGCTCCTTAAGGTCTTGGGGGATGCCGTCGATA----GACAAG 108685 Query 109634 AGCCACCAGCCT----TCACCATGAGATC---CTTCATCTCTTTCGACCAGAGACCGACC 109686 | ||| | | | | || || | || |||| ||| || || ||| | Sbjct 108684 ATAGACCCGTTTAGGGTAATAATTTCATTGCGCATCGTCTCGTTCCAC---AGTCCGCGC 108628 Query 109687 TTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGT 109746 || |||| || || |||| |||||||||||| || || || || || Sbjct 108627 TTGATGAGGTCCATCACGAGATACTTGTTGACCACCGGGAACTCGCCGCTCAGCACACGG 108568 Query 109747 CGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCA 109806 || | ||||||||| | |||| |||| ||||| ||||| |||||||| || || || | Sbjct 108567 CGCACGTAGATGTTGGACGTGAAGGGCTCGAAGCACTCGTTGTTGCCGAGAATCTGCGAG 108508 Query 109807 GTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACC 109866 ||||| ||||| ||||| || |||| ||||| ||| || | ||| || | | ||| Sbjct 108507 GTGGACGCTGTCGGCATCGGGGCCAGCAGAAGGGAGTTGCGCATACCGGTCTGCATCACC 108448 Query 109867 CGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATC--CCACA 109924 ||| | |||||| || | || ||||| || | | || ||||| Sbjct 108447 TTCTCCTTGAGGCTGTCCCAGTCCCAGCGGCCACTG--TTCGGGCGGGGGTTCTTCCACA 108390 Query 109925 TATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCT 109984 | || || || | |||| || || |||||||| ||||||||| |||| Sbjct 108389 TGTCGAACTGCAGAATGCCCTGGCTGGCCGGGCTGCCCTTGAAGGTCTCGTACGCGCCCT 108330 Query 109985 CAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATAT 110044 | ||| |||| ||| || ||||| | || ||| || || |||||||| || | Sbjct 108329 CCTCCTTCGCCATCTCCATAGATGCCTCCACCGCGGCAAAGTAGATCGTCTCAAAGATCT 108270 Query 110045 GAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACAT 110104 ||||||| | | | ||| | | | || || |||| ||||| ||| | | Sbjct 108269 CCGCATTCACCCGCTGCGCCTCGGCGCTCACAAAAGGCAGACGCAGCAGAATGAACGCGT 108210 Query 110105 CCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAG 110164 | || || ||||| |||||||| ||||||||||| | |||||| ||| | || | Sbjct 108209 CTGCCAGGCCCTGCACACCGAGGCCAATGGGGCGGTTGCGCATGTTGCTGCGAAGCGCCG 108150 Query 110165 TTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCG 110224 | || |||||||| ||||||||||||| || || || || || || | ||||| Sbjct 108149 TCTCAACGGGGTAGTAGTTGCGGTCGATCACACGGTTCAGGTTGCGTGTGATCTGCTTCG 108090 Query 110225 TGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGA 110284 ||| | ||| | || ||||| | | || ||| | ||| | ||| | Sbjct 108089 TGACAGTGTAGAGCAGCTTGTGATCGATCTCACGCTTCGCCTCGTCGACGAAGCGGGGTA 108030 Query 110285 GAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTT 110344 | || || || ||||| |||||||| | ||||| || |||||| || | || | Sbjct 108029 GCGCGATGGAGGCAAGGTTGCACACGGCGGTCTCCTCCGGCGAGGTGTACTCAACTATCT 107970 Query 110345 CCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGC 110404 ||||||||| ||| || | ||| ||| || | ||||||||| ||||| ||| ||||| Sbjct 107969 CCGTACACAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCCGTTGC 107910 Query 110405 ATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCT 110464 | || ||||| || || ||| | || || || || |||| |||| ||| || || Sbjct 107909 ACGCGTCCTTGTACAGGATGAACGGCACGCCCGTCTCAATCTGCGACTCGAGGATAGCGA 107850 Query 110465 TCCATACATCGGCGGCGGGGACAGT-TGCGTTAGCGA-GACCTTCCTCCTCGTACTTGGT 110522 ||| || || || | | ||| ||| || | | || ||| ||||||| Sbjct 107849 ACCACACCTCCTGCGCCTGAATAGTCTGC--ACGCCACGGCCCTCCGCCTCGTAGCGCTC 107792 Query 110523 GTACAAGTCCTCAAATTCCTGTCCGTACACATCA-GAAAGACCCTTC-GCCTTGTCGGGA 110580 || | | ||| || |||| ||||| ||| ||| || | | | | ||||| Sbjct 107791 ATATAGGCGCTCGAACTCCTCGCCGTAGCAGTCACTCAAGCCCGGACAGGCGT-TCGGGT 107733 Query 110581 CAGAAGAGGGACCAATTTCC-ACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCA 110639 | | || | ||| || || | ||| || || | ||||||||||||||| || | ||| Sbjct 107732 C-CATCAGCGTCCACTTCCCTTCGCTCTTC-ACACGCTTCATGAACAGGTCGGGGACCCA 107675 Query 110640 CATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTC 110699 || || |||| || ||||| ||| || || | || |||| | || Sbjct 107674 CAGGGCGTAGAACAGATCACGCGCACGCTGGTCGTCCTTGCCGGTGTTGCGCTTCAGGAG 107615 Query 110700 CAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG 110759 || ||| | | ||| || | |||||| || || || || || |||| | ||||| || Sbjct 107614 CAGAAAACCAAAGATGTCGGCGTGCCACGGCTCCAGGTACACGGCGAAAGCACCCTTGCG 107555 Query 110760 ---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAAT 110816 || ||| |||||| || ||||| || ||| ||||| || | ||||| || | Sbjct 107554 CTTACCACCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAACACACGCAGCATCGGTAC 107495 Query 110817 AATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTT--ATTGGCACGAATGTCG 110874 | ||| | || || || || || ||| | ||| | || || || | | Sbjct 107494 CAATCCGTTCGACGTGCCGTTCGTGCCGGCAATGTAG--CTTCCAGCAGCGCGGATATTG 107437 Query 110875 TGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTA 110934 || | |||| ||||| || |||||| || || || |||||||| | || || Sbjct 107436 TGCACGTGCAGGCCAATGCCGCCCGCCGCTTTGCTGATGACGGCACACTCCTTCAGGGTG 107377 Query 110935 CCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGA 110994 | ||||| || || || || |||| |||| | | ||||| || |||||| Sbjct 107376 TCGTAAATGCCGTCGATGCTGTCGTCCTTCATGGCCACCAAGAAGCACGAGCTCATCTGC 107317 Query 110995 GGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGAC 111054 || ||||| || || |||||||| || || || || || |||| | || | ||| Sbjct 107316 GGCTTCGGCGTGCCGGCGTTGAAGAGGGTTGGCGTGGCGTGCGTGAAGAATCCCTTCGAC 107257 Query 111055 ATC 111057 ||| Sbjct 107256 ATC 107254 >seq130 Length=68423 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 136712 TCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 ||| |||||||||| ||||||||||||| || |||| |||||||||| ||||||| || Sbjct 11333 TCTCATAGCTCAGTCGGTTAGAGCGTGGGTCTAATAAGCCCAAGGTCACAGGTTCGACCC 11392 Query 136772 CCGTTGGGAACAGCTTTT 136789 | ||||||| || ||||| Sbjct 11393 CTGTTGGGAGCA-CTTTT 11409 >seq39 Length=122082 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 136712 TCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 ||| |||||||||| ||||||||||||| || |||| |||||||||| ||||||| || Sbjct 115261 TCTCATAGCTCAGTCGGTTAGAGCGTGGGTCTAATAAGCCCAAGGTCACAGGTTCGACCC 115320 Query 136772 CCGTTGGGAACAGCTTTT 136789 | ||||||| || ||||| Sbjct 115321 CTGTTGGGAGCA-CTTTT 115337 >seq29 Length=133705 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 136712 TCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 ||| |||||||||| ||||||||||||| || |||| |||||||||| ||||||| || Sbjct 28672 TCTCATAGCTCAGTCGGTTAGAGCGTGGGTCTAATAAGCCCAAGGTCACAGGTTCGACCC 28613 Query 136772 CCGTTGGGAACAGCTTTT 136789 | ||||||| || ||||| Sbjct 28612 CTGTTGGGAGCA-CTTTT 28596 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 136712 TCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 ||| |||||||||| ||||||||||||| || |||| |||||||||| ||||||| || Sbjct 28913 TCTCATAGCTCAGTCGGTTAGAGCGTGGGTCTAATAAGCCCAAGGTCACAGGTTCGACCC 28972 Query 136772 CCGTTGGGAACAGCTTTT 136789 | ||||||| || ||||| Sbjct 28973 CTGTTGGGAGCA-CTTTT 28989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588967047564800