Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq231 100 4e-16 >seq231 Length=42738 Score = 100 bits (110), Expect = 4e-16 Identities = 181/263 (69%), Gaps = 4/263 (2%) Strand=Plus/Plus Query 197022 CAGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACA--TCTGGTTG 197079 ||| |||||||| |||||| || || ||||| || ||| | |||| |||| | Sbjct 12943 CAGCTCCTCGTCCTGAAAGCCTGTCCCTATCTTGCAGATGCTCTGGTACTCGTCTGACT- 13001 Query 197080 TCGGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCG 197139 |||| | ||| |||||||| | ||| | ||| || || || | || || |||| Sbjct 13002 -CGGGGTCGTAGCAGGCGAGCAGGAACCCACCGAAGACACCGGTGCGTTTACCTTTCCCG 13060 Query 197140 TTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTC 197199 | |||| | |||| |||||| || || |||||| || || ||||||||||| ||| Sbjct 13061 TAGAAGGCGGCGATGGGCACCAGGTCGAGCGTGTCGGTGACGCCCTCCATGTAATCCTTC 13120 Query 197200 TTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGG 197259 ||||| || |||||| || | ||||||| | |||||| || | | || || Sbjct 13121 TTCAGCTTCAGCCAGTAGTGCGAGCGCTTGGCAGGCGTGTAGGTGGCTTCCTCTTCAAGC 13180 Query 197260 GTCTTGATCATCAATCCCTCGCA 197282 ||||| | |||||| ||||| || Sbjct 13181 GTCTTCACCATCAAGCCCTCACA 13203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676719313710080