Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq31 251 1e-61 seq14 185 2e-41 >seq31 Length=128647 Score = 251 bits (278), Expect = 1e-61 Identities = 1018/1572 (65%), Gaps = 59/1572 (4%) Strand=Plus/Minus Query 212694 AGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATA 212753 |||||||| ||||| ||||| ||| | | | | ||| ||||||||| || | Sbjct 108816 AGGTTCAGCGACTGCGATTGGTCAATGTACTGACCGCGGTCGCGGGCCATGTCGATCAGC 108757 Query 212754 TCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCG 212813 | | ||| | || |||||||||||| | ||| || || ||||| | |||| |||| Sbjct 108756 TTGCGCTGAGGGATCTCCCACACGGTGCGGTAGAGCTCCTTAAGGTCTTGGGGGATGCCG 108697 Query 212814 GGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGC--TGCAG-GCGCATGTCCTCGTTC 212870 ||| | | |||||| || || ||| | | || |||||| ||||||| Sbjct 108696 TCGATAGACAAGATAGACCC---GTTTAGGGTAATAATTTCATTGCGCATCGTCTCGTTC 108640 Query 212871 CAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCT 212930 || || || | | ||| | | || || | |||||| | | |||| || || Sbjct 108639 CACAGTCCGCGCTTGATGAGGTCCATCACGAGATACTTGTTGACCACCGGGAACTCGCCG 108580 Query 212931 GAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCC 212990 ||||| | | | ||| | ||| || ||| ||||||||| || ||||||||| || Sbjct 108579 CTCAGCACACGGCGCACGTAGATGTTGGACGTGAAGGGCTCGAAGCACTCGTTGTTGCCG 108520 Query 212991 AGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCG 213050 |||||||| | ||| ||||| ||||| || |||| ||| || ||| | || ||| Sbjct 108519 AGAATCTGCGAGGTGGACGCTGTCGGCATCGGGGCCAGCAGAAGGGAGTTGCGCATACCG 108460 Query 213051 TGCTCGCCGATGAGG--CGCC--GAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTC 213106 || || || | | || || ||| | |||||||||| | |||| | | || Sbjct 108459 GTCT-GC--ATCACCTTCTCCTTGAGGCTGT-CCCAGTCCCAGCGGCCA--CTGTTCGGG 108406 Query 213107 --GTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGG 213164 | ||| ||||||||||| ||||||| ||||| | ||| | |||||||||| | Sbjct 108405 CGGGGGTTC---TTCCACATGTCGAACTGCAGAATGCCCTGGCTGGCCGGGCTGCCCTTG 108349 Query 213165 TAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAG 213224 | | ||| | ||| | |||||| |||| ||| || |||| || || || || Sbjct 108348 AAGGTCTCGTACGCGCCCTCCTCCTTCGCCATCTCCATAGATGCCTCCACCGCGGCAAAG 108289 Query 213225 TAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATC 213284 ||||| || ||||| |||||| || | | || ||||| | | | || |||| Sbjct 108288 TAGATCGTCTCAAAGATCTCCGCATTCACCCGCTGCGCCTCGGCGCTCACAAAAGGCAGA 108229 Query 213285 ATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTC 213344 || | |||| | || ||||| ||||| || |||| ||| ||||| | || | | Sbjct 108228 CGCAGCAGAATGAACGCGTCTGCCAGGCCCTGCACACCGAGGCCAATGGGGCGGTTGCGC 108169 Query 213345 AGGTTAGACTTGGAGCACTC-CTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAG 213403 | ||| | | ||| | ||| | |||||| |||||| |||||| | ||| || Sbjct 108168 ATGTT-GCTGCGAAGCGCCGTCTCAACGGGGTAGTAGTTGCGGTCGATCACACGGTTCAG 108110 Query 213404 GTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAAC--ACGTAGCCC 213461 |||||| ||| | || |||||| | || || ||||| || | ||| | | Sbjct 108109 GTTGCGTGTGATCTGCTTCGTGACAGTGTAGAGCAGCTTGTGATCGATCTCACGCTTCGC 108050 Query 213462 CCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGC---CACCTCC 213518 | || | || || || || |||||| ||| |||||||| ||||| | ||||| Sbjct 108049 C--TCGTCGACGAAGCGGGGTAGCGCGATGGAGGCAAGGTTGCACACGGCGGTCTCCTCC 107992 Query 213519 TGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGG 213578 | ||| |||||||| | ||||| || |||||||| ||| ||||||||| ||| Sbjct 107991 GGCGAG---GTGTACTCAACTATCTCCGTACACAGGTTCGAGCACTTGATGGTGCCGAGG 107935 Query 213579 TTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTC 213638 |||| ||||| ||||| ||||| | |||||||| || ||| | || || ||| Sbjct 107934 TTCTTCTGGTTCGACTTGCCGTTGCACGCGTCCTTGTACAGGATGAACGGCACGCCCGTC 107875 Query 213639 TCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACA 213698 || | ||| ||| | || || | ||| | | |||| | ||| | | ||| Sbjct 107874 TCAATCTGCGACTCGAGGATAGCGAACCACACCT-CCTGCGCCTGAATA---GTCTGCAC 107819 Query 213699 GCTCCGGGCGTA-GCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAG-ACCC 213756 || ||| | | |||||||| | || || || | ||| || | ||| || | | Sbjct 107818 GCCACGGCCCTCCGCCTCGTAGCGCTCATATAGGCGCTCGAACTCCTCGCCGTAGCAGTC 107759 Query 213757 TGTCCAGTCCCGGACAGGA-TGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTG-AC 213814 || || |||||||||| | |||| | ||| || |||| | ||| || |||| || Sbjct 107758 ACTCAAG-CCCGGACAGGCGTTCGGGTC-CATCAGCGTCCACTTCCCTTCG-CTCTTCAC 107702 Query 213815 TCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTC 213874 | || |||||||||||| ||||||||||| ||| |||||| || | | | | || Sbjct 107701 ACGCTTCATGAACAGGTCGGGGACCCACAGGGCGTAGAACAGATCACGCGCACGCTGGTC 107642 Query 213875 GTCCACTCCAGAGTTTTTGCGC---AGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGG 213931 |||| || | ||| |||| || ||||| |||||||||| ||||||||||| Sbjct 107641 GTCCTTGCCGGTGTT---GCGCTTCAGGAGCAGAAAACCAAAGATGTCGGCGTGCCACGG 107585 Query 213932 CTCCATGTAGATGGCAAAGGCGCCCGGCCTCTT---GCCGCCCTGGTCCACCAGCCTGGC 213988 ||||| ||| | ||| || || ||| | ||| || ||||||||||| | ||| Sbjct 107584 CTCCAGGTACACGGCGAAAGCACCCTTGCGCTTACCACCACCCTGGTCCACGTAGCGGGC 107525 Query 213989 CACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGC 214048 ||||||| | ||||| | ||||||| ||||| ||| ||||| || || || Sbjct 107524 GGTGTTGTTGAACACACGCAGCATCGGTACCAATCCGTTCGACGTGCCGTTCGTGCCGGC 107465 Query 214049 TATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTT 214108 || || || | || | | ||| || | || || ||||| || || || Sbjct 107464 AATGTAGCTTCCAGCAGCGCGGATATTGTGCACGTGCAGGCCAATGCCGCCCGCCGCTTT 107405 Query 214109 GGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAG 214168 | ||| | ||| || | ||| || || |||||| | |||||||| || | | Sbjct 107404 GCTGATGACGGCACACTCCTTCAGGGTGTCGTAAATGCCGTCGATGCTGTCGTCCTTCAT 107345 Query 214169 GTTCAGCAAGAAGC---AGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGT 214225 | || |||||||| ||||| | ||| ||| | | || ||| | |||||| || || Sbjct 107344 GGCCACCAAGAAGCACGAGCTC---ATCTGCGGCTTCGGCGTGCCGGCGTTGAAGAGGGT 107288 Query 214226 GGGGCTGGCATG 214237 || |||| || Sbjct 107287 TGGCGTGGCGTG 107276 >seq14 Length=160581 Score = 185 bits (204), Expect = 2e-41 Identities = 540/819 (66%), Gaps = 17/819 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||| || || || || | ||||| |||||||| ||||| || | || |||||| |||| Sbjct 143769 CTGATACTCACCGACCTTCTTCTCGAAGAAGTTCGTCTTGCCTTGCAGCGAGATCATCTC 143710 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTC-AGGCCCATCTGTTCCAGCA 47957 ||||||| ||| || | | ||| || | | || || |||| | | |||| Sbjct 143709 CATGAAGTCGAACGGCTGCGTCACGTTGTAGTGCT-TCTCGAGCCCCAGCGACACAAGCA 143651 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | ||||| || |||||||||| | ||||| ||| ||||||||| | | Sbjct 143650 GCCGGTCCGCCACAAACTCGATGTACTGCGACATCAGGTCCGCGTTCATGCCGACCAACC 143591 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| |||| || | || ||||| ||| || | ||| || ||| | | |||| Sbjct 143590 GCACAGGCAGCGCGTCGCAGATGAACTCGCGCTCAATGTTCACCGCGTCCACGATGATCT 143531 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGC---AGGTGCTTGGCATAGAGCATGCAGG 48134 | |||||| ||| ||| ||| || | |||| | | ||||| | ||| | Sbjct 143530 CCAGAACGCG---CTCACGGGGCAGCTTGTGCTTGATGTGCGAGTCGTAGAGGAGGCACG 143474 Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 | |||||| |||||| ||| ||||| || ||||||| ||||| |||| || || | Sbjct 143473 CGAAGTCCGTGTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTGCTGAAGGTCAGCCCGG 143414 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 |||| | ||| | || || |||||||| | || ||| || || |||||||| |||| Sbjct 143413 GCATCAGCCCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCGGAGAAGAATATGC 143354 Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA-GATC 48313 |||| || || ||||| || | |||| ||| | | ||||| | | || |||| Sbjct 143353 CCTCAACCGCGGCGAAGCCGATCAGCCGCTC-CTG---GAAGCTCGCGCGGCTCCCGATC 143298 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373 || | ||||| || |||||||||| | ||| || ||||||| || || | | Sbjct 143297 CAACGCACAGCCCACTCCGCCTTCTTCTGAACGCACGGGATCGTCTGGATTGCGTGCAGC 143238 Query 48374 AGCTTCTTGCACTCACCT-GC-GTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCT 48431 ||| | || || ||| || ||||| | || || |||||| | |||| ||| Sbjct 143237 AGCCGCA-GCT-TCTCCTCGCTGTCCGTGATGTACGTGTCAAGCAGCACCGAGTACGTCT 143180 Query 48432 CAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCT 48491 | ||||| | ||||| || | |||||| ||||||||||| | ||||| ||||| Sbjct 143179 CCGAGTGGATGTTCTCCATCATCAACTGGAAGCCGTAGAAGGCGCGCGCCTCCGGCACCT 143120 Query 48492 GCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAA 48551 ||| || || ||| | || | || ||||| |||| || || || | |||| Sbjct 143119 TCACGTCGGTCATGAAGCGCTGCGCGAGGTTCTCGATGACGATGCCGTCGCTCCCTGCAA 143060 Query 48552 AGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCT 48611 | || |||||||| || || | ||| || |||||| || | | | | |||| ||| Sbjct 143059 AAAAAGCAAGGACGTGCTTGATGAAGTGCCGCTCGCCGTCGTTTAACTTCTCCCAGTCCT 143000 Query 48612 GTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGA 48650 | ||| ||||||||||| | || |||| ||||||| Sbjct 142999 TCATGTCGTTGCCCAGGTCGATCTCCTCCAGCGTCCAGA 142961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931518640701440