Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq610 315 9e-81 seq206 197 2e-45 seq38 127 3e-24 >seq610 Length=4050 Score = 315 bits (348), Expect = 9e-81 Identities = 1027/1580 (65%), Gaps = 28/1580 (2%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 ||||||||||| || | || || || ||||| || ||||| || ||||| || || || Sbjct 2190 GCTATTGGTATTGACCTGGGCACGACGTACTCGTGCGTTGGCGTGTGGCAGAACGAGCGC 2131 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| || |||| ||||| || ||||| || || || ||||||||||| || || Sbjct 2130 GTGGAGATCATTGCGAACGACCAGGGTAACCGCACGACGCCGTCGTACGTTGCGTTCACG 2071 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | ||| ||||| | || |||||||| || || ||| || |||||||| ||| Sbjct 2070 GACACTGAGCGTCTGATCGGCGATGCCGCGAAGAACCAGGTCGCGATGAACCCGCACAAC 2011 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || || || ||||||||||| || ||||| |||||||| || || || | Sbjct 2010 ACGGTGTTCGACGCGAAGCGCCTGATTGGCCGCAAGTTCAACGACTCTGTCGTGCAGGCG 1951 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTG-GCTGATAAGCCTATGATTAA 195597 || || ||| ||||| | | | ||| || || | | | || ||||| |||| Sbjct 1950 GACATGAAGCACTGGCCCT-TCAAGGTGACGACGAAGGGCGACGACAAGCCCGTGATCGT 1892 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 || | || ||||| ||| |||| || | || || || || || |||||| | Sbjct 1891 CGTGCAGTTCCACGGCGAGGAGAAGACGTTCACGCCGGAGGAGATCAGCTCGATGGTGCT 1832 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | | |||||||||||||| || || | | | | || || ||||| | || || || Sbjct 1831 GCTGAAGATGAAGGAGACGGCTGAGGCGTACCTCGGCAAGCAGGTGAAGAAGGCCGTGGT 1772 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 ||| || || || ||||||| || || || || |||||||| |||||||| | | || Sbjct 1771 GACGGTGCCCGCCTACTTCAACGACTCCCAGCGCCAGGCGACGAAGGACGCCGGCACGAT 1712 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 || || || | || | || ||||| || || || || ||||| || || || || Sbjct 1711 CGCTGGCCTGGAGGTGCTGCGCATCATCAACGAGCCGACCGCCGCTGCTATCGCGTACGG 1652 Query 195838 TCTGGACAAGAACAAGGACG---AAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGG 195894 |||||||||| | | |||| | || || || ||||||| ||||| ||||| || Sbjct 1651 TCTGGACAAGGGCGACGACGGCAAGGAGCGCAACGTGCTGATCTTCGATCTGGGTGGCGG 1592 Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954 |||||| ||||| | || || | || || || || || ||||| || ||||| || Sbjct 1591 TACGTTCGATGTGACGCTGCTGACGATCGACGGCGGCATCTTCGAGGTGAAGGCCACGAA 1532 Query 195955 TGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCT-- 196012 || | || || || || ||||| || || ||| || || | | | || ||| Sbjct 1531 CGGCAACACCCACCTCGGCGGTGAGGACTTTGATAACCGCCTGGT--GACGTTCTTCTGC 1474 Query 196013 GATGAGTTCCGTCGAAAGAATAAG---AAAGATATTTC-TGGAAATCCTAGGG--CTCTT 196066 || |||||| || ||||| ||| || || | || | ||| | || | |||| Sbjct 1473 GAGGAGTTCAAGCGTAAGAACAAGGGCAAGGACCTGTCGTCGAA---CCAGCGCTCTCTG 1417 Query 196067 CGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACA 196126 || || || | ||||| || || || ||||| || || || || || || | || | Sbjct 1416 CGCCGCCTGCGCACTGCCTGCGAGCGCGCCAAGCGCACGCTGTCGTCCGCGACGCAGGCG 1357 Query 196127 ATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCA 196186 | | | ||||| || || |||| ||| | |||||| | |||| || ||||| || Sbjct 1356 ACGATCGAGATCGACGCGCTGTTCGACAACGTGGACTTCCAGGCAACCATCACCCGCGCG 1297 Query 196187 CGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTA 196246 || || || ||| | | || |||| | | || | ||||| || | || Sbjct 1296 CGCTTCGAGGAGCTGTGCGGCGACCTGTTCCGCAGCACGATCCAGCCTGTGGAGCGCGTG 1237 Query 196247 CTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCA 196306 || | ||||| |||||||| ||| || | || | || || ||||| || || Sbjct 1236 CTGCAGGACGCGAAGATGGACAAGCGCTCCGTGCACGACGTCGTGCTGGTGGGTGGCTCC 1177 Query 196307 ACCCGTATTCCGAAGATTCAACAGATGCTT---TCTAGCTTCTTCAATAATAAAGATTTA 196363 || ||||| |||||| | |||| ||| || ||||||| || || | Sbjct 1176 ACGCGTATCCCGAAGGT---GCAGAGCCTTGTGTCCGACTTCTTCGGCGGCAAGGAGCTG 1120 Query 196364 AACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATT 196423 ||||| | |||||||| || || || || || || || || || || ||||| || Sbjct 1119 AACAAGAGCATCAACCCCGACGAGGCCGTGGCGTACGGCGCTGCGGTGCAGGCGTTCATC 1060 Query 196424 CTCTCAGGTGTTGACAATAATAACGTCCAAGATCTT-CTGCTACTTGATGTTGCACCCGT 196482 || | || | | | || | | | || ||| ||||| || || || | || | Sbjct 1059 CTGACCGGCGGCAAGAGCAAGCA-GACGGAGGGCTTGCTGCTGCTGGACGTGACGCCGCT 1001 Query 196483 ATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAAC 196542 | ||||| |||| || || ||||| || ||||| | || | | ||||| || Sbjct 1000 GACGCTGGGCATTGAGACTGCCGGTGGCGTGATGACGGCGCTGATCAAGCGCAACACGAC 941 Query 196543 TATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCA 196602 || ||||| |||||| || |||| || ||||| | || ||||| || || || || Sbjct 940 GATCCCGACGAAGAAGAGCCAGATCTTCTCGACGTACGCTGACAATCAGCCCGGCGTGCA 881 Query 196603 TATTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTT 196661 || || || | || || || || | | || | ||||| ||| || || || | Sbjct 880 CATCCAGGTGTTCGAGGGCGAGCG-TGCGATGACGAAGGACTGCCACTCCCTGGGCACGT 822 Query 196662 TCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCG 196721 |||| || | || || || | || || | ||||| || |||||| | || ||||| Sbjct 821 TCGACCTGTCCGGCATCCCGCCGGCGCCGCGCGGTGTGCCGCAGATTGAGGTGACCTTCG 762 Query 196722 ATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTG 196781 | | ||||| || || || || ||||| | || ||||| |||| | ||||| Sbjct 761 ACCTGGACGCGAACGGCATCCTGAACGTATCCGCGGAGGAGAAGGGCACCGGCAAGCGCA 702 Query 196782 AAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGG 196841 | |||| || || || |||||||| || || |||||||| || || || |||| Sbjct 701 ACCAGATCACCATCACGAACGACAAGGGCCGCCTGAGCAAGGAGGAGATCGAGCGCATGG 642 Query 196842 TTCAAGATGCGGAAAAGTAC 196861 | | || ||| |||||| Sbjct 641 TGAACGACGCGTCCAAGTAC 622 >seq206 Length=48879 Score = 197 bits (218), Expect = 2e-45 Identities = 413/610 (68%), Gaps = 8/610 (1%) Strand=Plus/Minus Query 195383 GGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTCGTTGGAGAT 195442 || ||||| || || || |||||||| ||||| || || | || || | || || ||| Sbjct 3846 GGTAACCGCACGACGCCGTCGTACGTCGCCTTCACGGAGACAGAGCGCTTGGTCGGCGAT 3787 Query 195443 GCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCGAAGCGTCTT 195502 ||||| || || ||| || |||||||| |||| || |||| || |||||||| | Sbjct 3786 GCCGCGAAGAACCAGGTTGCGATGAACCCGCTCAACACAATCTTCGATGCGAAGCGCATG 3727 Query 195503 ATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACTGGTCTTATGAA 195562 || || |||||||| || | | | || || || ||| ||||| | | | || Sbjct 3726 ATCGGGCGCAAGTTCGACGACCCGGATCTGCAGTCGGACATGAAGCACTGGCCCT-TCAA 3668 Query 195563 GTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAA- 195621 | || || | | | ||||| | | || || || | || || | || Sbjct 3667 GGTGACGACGAAGGAG--GGCAAGCCCGTCGTCAACGTGGAGTACCAGGGATCCACCAAG 3610 Query 195622 ACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGA 195681 || | | | ||||||||||| || | |||||| || |||||||||||||| || || Sbjct 3609 ACGTTCTTC-CCCGAAGAAATCTCCGCGATGGTGCTGCAAAAGATGAAGGAGACGGCTGA 3551 Query 195682 ATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGA 195741 | | | | || | | || || || || || ||||| || || || ||||||| || Sbjct 3550 GGCGTACCTCGGAACGGCGGTCAAGGACGCCGTGGTGACGGTGCCGGCCTACTTCAACGA 3491 Query 195742 TTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAAT 195801 || || || |||||||| |||||||| | | || ||||| || ||| || | || Sbjct 3490 CTCCCAGCGTCAGGCGACGAAGGACGCAGGCTCCATCGCGGGCCTCAACGTGCTGCGCAT 3431 Query 195802 TATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGAC---AAGAACAAGGACGA 195858 ||||| || || || || || || || || || || ||||| |||||| | | | Sbjct 3430 CATCAACGAGCCGACCGCCGCCGCCATCGCGTACGGAATGGACCGCAAGAACGATAAAGG 3371 Query 195859 AGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAA 195918 || || || || ||||||| ||||| ||||| |||||||||||||| | || | | Sbjct 3370 TGAGAAGAACGTGCTGATCTTCGATCTGGGTGGCGGTACGTTTGATGTGACGCTGTTGAC 3311 Query 195919 TATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGA 195978 || ||||| || | ||||| || ||||| || ||||||||||| ||||| ||||| || Sbjct 3310 GATCGAAGGCGGCGTCTTCGAGGTGAAGGCCACGGCTGGTGATACCCATCTCGGTGGCGA 3251 Query 195979 AGATTTCGAT 195988 || |||||| Sbjct 3250 GGACTTCGAT 3241 >seq38 Length=122924 Score = 127 bits (140), Expect = 3e-24 Identities = 224/327 (69%), Gaps = 6/327 (2%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||| | |||| | ||| | || | | ||||| | || || ||||| Sbjct 95225 AAGATGAAGGACATCTCGGAGACCTTCCTCGGCGAGAAGGTGAAGAACGCCGTGGTGACG 95166 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| ||||||| || | || || ||||| || |||||| ||| | || || Sbjct 95165 GTGCCTGCCTACTTCAACGACGCTCAGCGCCAGGCTACCAAGGACTCTGGTAAGATCGCC 95106 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| ||| || | |||||||| || || || || ||||| ||||| |||||||| Sbjct 95105 GGTCTCAACGTGGTTCGCATTATCAACGAGCCGACTGCCGCTGCTATTGCCTATGGTCT- 95047 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 ||||||| || || || || | | |||| || || |||||||| |||||| Sbjct 95046 -----CAACAAGGCCGGTGAGAAGAACATCCTTGTCTTCGACCTGGGTGGTGGCACGTTT 94992 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 ||||| || ||||| | || || | || | || || || ||| || ||||| Sbjct 94991 GATGTGTCGCTTCTGACGATCGACGAAGGCTTCTTTGAGGTGGTGGCGACGAACGGTGAC 94932 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGAT 195988 || || || ||||| || || |||||| Sbjct 94931 ACCCACCTTGGTGGCGAGGACTTCGAT 94905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657852400491520