Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq73 98.7 3e-16 >seq73 Length=88685 Score = 98.7 bits (108), Expect = 3e-16 Identities = 213/315 (68%), Gaps = 8/315 (3%) Strand=Plus/Plus Query 37203 GGGCGACCTGGGCATCATCCCTGGCTCGATGGGTGC--GAAGTCATTCATCGTTCGCGGC 37260 |||||| || | | |||| ||||| || |||||||| | || | | |||| |||||| Sbjct 16416 GGGCGAACTAGCCGTCATTCCTGGTTCAATGGGTGCTCGTAGCTA--CGTCGTACGCGGC 16473 Query 37261 AAGGGAAA--TTCCGAATCGTTCTGCTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCC 37318 | ||| || || ||| | ||| || ||| ||||| || || || || | Sbjct 16474 AGGGGCAACATTGCGAGC--TACTGTTCCTGCTCTCACGGCGCAGGACGGCGCTACAGTC 16531 Query 37319 GGGCCGAAGCAAAACGCCGGTTCACAGTCGAGGATCATGAGGCGGCCACCAAAGGTATCG 37378 | | || || ||||| ||||| || | ||||| | ||| ||||| || || | Sbjct 16532 GCGGAGAGGCGCGCCGCCGTTTCACTGTTGCTGATCACGCGGCCGCCACGTCTGGGATTG 16591 Query 37379 AGTGCCGCAAAGATGCCGAAGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGATG 37438 ||||||| || |||| || ||| | || || |||||||||||||| || |||||||| | Sbjct 16592 AGTGCCGTAAGGATGACGGTGTGCTGGATGAAACGCCAGCGGCTTATAAAGACATCGACG 16651 Query 37439 CGGTCATGGCCGCGCAATCCGCCCTGGTGGACATCGTGCACACGCTGCGCCAAGTCGTTT 37498 || || || ||||| | |||||||| || || ||||| ||||| | | Sbjct 16652 ACGTGATAGCGGCGCAGGAGGATCTGGTGGAGGTCATGGCGGTCCTGCGGCAAGTTTTGT 16711 Query 37499 GCGTGAAGGGTTGAG 37513 |||| ||||| |||| Sbjct 16712 GCGTAAAGGGATGAG 16726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139281188750592