Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq31 500 8e-137 seq14 223 3e-53 seq24 203 3e-47 >seq31 Length=128647 Score = 500 bits (554), Expect = 8e-137 Identities = 1188/1770 (67%), Gaps = 49/1770 (3%) Strand=Plus/Minus Query 147938 GGCAGCGGGTTGAGTGCGCAGATAGTACATGCCCGTCTTGAGGCC-CATGCGCCATGCGT 147996 |||||| | | |||||||| ||||||| || ||||||||||| || | ||| | || Sbjct 108922 GGCAGCCGCCTTCGTGCGCAGGTAGTACACACCGGTCTTGAGGCCACACTC-CCAGGTGT 108864 Query 147997 AGTCGTGCACCGACGACATGAGCGTGTACGTCGGGTGCGGCACAAACAGATTAAACGACT 148056 || ||| ||||| || | | || |||| | ||| ||||| || | ||||| Sbjct 108863 AGAAAAGCATCGACGTGATCTGGCCAGAGGTGGGGTTCTGCAGGAACAGGTTCAGCGACT 108804 Query 148057 GGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTC- 148115 | ||||||||| || || ||||| |||||| || || || ||| || Sbjct 108803 GCGATTGGTCAATGTACTGACCGCGGTCGCGGGCCATGTCGATCAG---CTTGCGCTGAG 108747 Query 148116 --ATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCT 148173 |||||||| | || ||| ||| ||| | | | ||| ||||||||||| | Sbjct 108746 GGATCTCCCACACGGTGCGGTAGAGCTCCTTAAGGTCTTGGGGGATGCCGTCGATAGACA 108687 Query 148174 GCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTC-CGTGT-ATAGGTTGAG 148231 | || ||| | | || ||| | ||||||||| |||| ||| | || | | Sbjct 108686 AGATAGACCCGTTTAGGGTAATAATTTCATTGCGCAT--CGTCTCGTTCCACAGTCCGCG 108629 Query 148232 CTCGATCAGGTC-ATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGC 148290 || ||| ||||| ||| | ||||||| || |||||| | ||||||||| ||||| | Sbjct 108628 CTTGATGAGGTCCATC-ACGAGATACTTGTTGACCACCGGGAACTCGCCGCTCAGCACAC 108570 Query 148291 GCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCG 148350 | |||| || | |||| ||| || || || || ||||||||||||| | |||||||| Sbjct 108569 GGCGCACGTAGATGTTGGACGTGAAGGGCTCGAAGCACTCGTTGTTGCCGAGAATCTGCG 108510 Query 148351 CGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTA 148410 ||| | || || ||||| || | ||| || |||||||||| |||| | | | Sbjct 108509 AGGTGGACGCTGTCGGCATCGGGGCCAGCAGAAGGGAGTTGCGCATACCGGTCTGCATCA 108450 Query 148411 TTTTGCGCTTCAGAGCCG-CCCAGTCCCAGAGCGGCGACGGT---GTCACG-----TTCC 148461 || ||| || || | ||||||||||| |||| || || | | | |||| Sbjct 108449 CCTTCTCCTTGAG-GCTGTCCCAGTCCCAG--CGGCCACTGTTCGGGCGGGGGTTCTTCC 108393 Query 148462 ACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTC 148521 |||||||| ||||||||||||| |||| || |||||||||| | | | ||||| | Sbjct 108392 ACATGTCGAACTGCAGAATGCCCTGGCTGGCCGGGCTGCCCTTGAAGGTCTCGTACGCGC 108333 Query 148522 CGTGCGCCGCCGCCAGTTCGC-AGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCA 148580 | | | || ||||| || || | ||||| | |||| | |||| |||||||| Sbjct 108332 CCTCCTCCTTCGCCATCTCCATAGAT-GCCTCCACCGCGGCAAAGTAGATCGTCTCAAAG 108274 Query 148581 ATTTGCCTGTTGAGCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAAC 148640 || | | || | | || |||| |||| | | |||| ||||||| | | ||| Sbjct 108273 ATCTCCGCATTCACCCGCTGCGCCTCGGCGCTCACAAAAGGCAGACGCAGCAGAATGAAC 108214 Query 148641 GCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGC 148700 ||||| || |||||||| || || | ||||||||| |||| |||||| | | || Sbjct 108213 GCGTCTGCCAGGCCCTGCACACCGAGGCCAATGGGGCGGTTGCGCATGTTGCTGCGAAGC 108154 Query 148701 GCGCTCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACC 148760 || |||| | || |||| |||||||||||| | || || ||||| | | | Sbjct 108153 GCCGTCTCAACGGGGTAGTAGTTGCGGTCGATCACACGGTTCAGGTTGCGTGTGATCTGC 108094 Query 148761 TTTGTAATTCTGCGCAGCAATTCAAAATCGTACT------TGTCATCTACGATGCATCGG 148814 || || | || |||| | |||| || | | || ||| | | ||| Sbjct 108093 TTCGTGACAGTGTAGAGCAGCTTGTGATCGATCTCACGCTTCGCCTCGTCGACGAAGCGG 108034 Query 148815 TTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACG 148874 | ||||| ||||| || ||||||||||| ||||| ||||| | | ||||||| || Sbjct 108033 GGTAGCGCGATGGAGGCAAGGTTGCACACGGCGGTCTCCTCCGGCGAGGTGTACTCAACT 107974 Query 148875 ATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTG 148934 ||||| | ||||| || ||| ||||| ||| | |||||| || || ||||| | Sbjct 107973 ATCTCCGTACACAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCCG 107914 Query 148935 TTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT- 148993 |||||||||||||||||||| ||| |||| |||| || || | ||||| || | || Sbjct 107913 TTGCACGCGTCCTTGTACAGGATGAACGGCACGCCCGTCTCAATCTGCGACTCGAGGATA 107854 Query 148994 --GAACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTAT 149051 ||||| || |||||||| | | |||| || || |||||| |||||| Sbjct 107853 GCGAACC---ACACCTCCTGCGCCTGAATAGTCTGCACGCCACGGCCCTCCGCCTCGTAG 107797 Query 149052 AAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATC-GTCGAGACCGGGGCACTTGTG 149110 ||| || ||||||||| ||||||||||||| || || || || || || || Sbjct 107796 CGCTCATATAGGCGCTCGAACTCCTCGCCGTAGCAGTCACTCAAG-CCCGGACAGGCGTT 107738 Query 149111 CGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCAC 149170 |||| ||| |||| |||| || || | ||| |||||||| ||||| ||||| || Sbjct 107737 CGGGTCCATCAGCGTCCACTTCCCTTCGCTCTTCACACGCTTCATGAACAGGTCGGGGAC 107678 Query 149171 CCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAG 149230 ||| || ||||| | || || ||||| ||| || ||| ||||||| ||| Sbjct 107677 CCACAGGGCGTAGAACAGATCACGCGCACGCTGGTCGTCCTTGCCGGTGTTGCGCTTCAG 107618 Query 149231 GTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTT 149290 | || | | || ||||| |||||||||||||| | |||||| |||| || ||||| Sbjct 107617 GAGCAGAAAACCAAAGATGTCGGCGTGCCACGGCTCCAGGTACACGGCGAAAGCACCCTT 107558 Query 149291 GCGCTT---GCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGG 149347 |||||| || |||||||| |||| ||| | ||||||| ||||| || | ||| || Sbjct 107557 GCGCTTACCACCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAACACACGCAGCATCGG 107498 Query 149348 TTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTT 149407 | | | || | | |||||||| || | |||| || || || || | || Sbjct 107497 TACCAATCCGTTCGACGTGCCGTTCGTGCCGGCAATGTAGCTTCCAGCAGCGCGGATATT 107438 Query 149408 GTGCACGTTGACGCCGATGCCG-CCGCCGTACTTTG-AGATGGCCGCGCAGTCGCCGAGC 149465 |||||||| | ||| |||||| |||||| ||||| |||| | || || || || Sbjct 107437 GTGCACGTGCAGGCCAATGCCGCCCGCCG--CTTTGCTGATGACGGCACACTCCTTCAGG 107380 Query 149466 GTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATT 149525 || ||| ||||| |||||||||||| |||||||| || || |||||||||| ||| Sbjct 107379 GTGTCGTAAATGCCGTCGATGCTGTCGTCCTTCATGGCCACCAAGAAGCACGAGCTCATC 107320 Query 149526 TGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGG 149585 ||||| |||||||||| ||| | ||| || ||||||| || || || || Sbjct 107319 TGCGGCTTCGGCGTGCCGGCGTTGAAGAGGGTTGGCGTGGCGTGCGTGAAGAATCCCTTC 107260 Query 149586 CTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCG 149645 ||||| ||||||| |||| ||||| | || || | |||||||| | ||| Sbjct 107259 GACATCAATTCGTACGTCTCGCGCACGTTCTTCAAATCCCTGAGGTGGATGCCGAGAGCG 107200 Query 149646 ACGCGCATCAGCATATGCTGCGGTCGCTCC 149675 || |||| | || |||||||| |||||| Sbjct 107199 ACACGCAGGAACAACTGCTGCGGCCGCTCC 107170 >seq14 Length=160581 Score = 223 bits (246), Expect = 3e-53 Identities = 557/830 (67%), Gaps = 36/830 (4%) Strand=Plus/Minus Query 120355 TACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATA 120414 ||||| ||||| ||||| || ||||| || ||||| | || ||| || | | ||| Sbjct 143765 TACTCACCGACCTTCTTCTCGAAGAAGTTCGTCTTGCCTTGCAGCGAGATCATCTCCATG 143706 Query 120415 AACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGG 120474 || |||||||| | || |||| ||| ||| | |||| | || ||||| ||| Sbjct 143705 AAGTCGAACGGCTGCGTCACGTTGTAGTGCTTCTCGAGCCCCAGCGACACAAGCAGCCGG 143646 Query 120475 TCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACC 120534 ||||| |||||||| ||||||| |||| | |||||||||||| | |||| ||| Sbjct 143645 TCCGCCACAAACTCGATGTACTGCGACATCAGGTCCGCGTTCATGCCGACCAACCGCACA 143586 Query 120535 GGCAACGCCGACGT-GAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCGAG 120593 |||| ||| | || || ||||| |||||||| |||||| ||| || || | || Sbjct 143585 GGCAGCGC-GTCGCAGATGAACTCGCGCTCAATGTTCACCGCGTCCACGATGATCTCCAG 143527 Query 120594 CATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGCAAAGTC 120653 | | | ||||| |||||| | |||| ||| |||| |||||||| ||||| Sbjct 143526 AACGCGCTCACGGGGCAGCTTGTGCTTGATGTGCGAGTCGTAGAGGAGGCACGCGAAGTC 143467 Query 120654 CGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGAT 120713 |||||||||||||||||| ||||| || ||||||||||| || ||||| |||||||| | Sbjct 143466 CGTGTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTGCTGAAGGTCAGCCCGGGCATCAG 143407 Query 120714 GCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCC-GAAAAGAACACGCCCTCCA 120772 || | |||| | |||| | || ||| | | ||| || ||||| | |||||| | Sbjct 143406 CCCGCGCTTCTTCAGCCAGAACAGCGC-GCAGAACGACCCGGAGAAGAATATGCCCTCAA 143348 Query 120773 CGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGC-CGTCTTGCTGTCGATCCACTTC 120831 | ||| ||| ||| || ||||| || |||| || ||| ||||||| | Sbjct 143347 CCGCGGCGAAGCCGATCAGCCGCTCCTGGAAGCTCGCGCG----GCTCCCGATCCAACGC 143292 Query 120832 ATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAGCAGCATG 120891 | |||||||| ||||| || | |||||||| ||| || || |||| ||||||| Sbjct 143291 ACAGCCCACTCCGCCTTCTTCTGAACGCACGGGATCGTCTGGATTGCGTGCAGCAGC--- 143235 Query 120892 TCGC-GCTCGCCCTCCTCCGCAATCAGCTGATGGATG--------AGCAGATTGTACATT 120942 ||| ||| ||||| ||| || | ||||| | | |||| |||| | Sbjct 143234 -CGCAGCT---TCTCCT-CGCTGTCCG-TGATGTACGTGTCAAGCAGCACCGAGTACGTC 143181 Query 120943 TCCGTGTGCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCCTCCAGCTCG 121002 |||| ||| | | ||| |||| || || | ||| ||| |||||||| || | Sbjct 143180 TCCGAGTGGATGTTCTCCATCATCAACTGGAAGCCGTAGAAGGCGCGCGCCTCCGGCACC 143121 Query 121003 GGCACCGCCCGCTGCATGTA---CTCGATAAGGTTAATATTCACGATACTGTCGGCGGCG 121059 || || | | |||| | || ||||| | ||||| | |||| | Sbjct 143120 TTCA-CGTCGG--TCATGAAGCGCTGCGCGAGGTTCTCGATGACGATGCCGTCGCTCCCT 143064 Query 121060 GCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGAGCTTGTGCGCA 121119 || || || || || ||||||||||| ||||| |||||| |||| | | ||| | | Sbjct 143063 GCAAAAAAAGCAAGGACGTGCTTGATGAAGTGCCGCTCGCCGTCGTTTAACTTCT--CCC 143006 Query 121120 AAATCGTCATAGTCCTTGGACAGGTCGACCTCCTCCACCTTCCACATGCA 121169 | | |||| ||| ||| |||||||| |||||||| | |||| ||||| Sbjct 143005 AGTCCTTCAT-GTCGTTGCCCAGGTCGATCTCCTCCAGCGTCCAGATGCA 142957 >seq24 Length=140537 Score = 203 bits (224), Expect = 3e-47 Identities = 369/535 (69%), Gaps = 5/535 (1%) Strand=Plus/Minus Query 120355 TACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATA 120414 ||||| ||||| ||||| || ||||| || ||||| | || ||| || | | ||| Sbjct 541 TACTCACCGACCTTCTTCTCGAAGAAGTTCGTCTTGCCTTGCAGCGAGATCATCTCCATG 482 Query 120415 AACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGG 120474 || |||||||| | | |||| ||| ||| | |||| | || ||||| ||| Sbjct 481 AAGTCGAACGGCTGCGCCACGTTGTAGTGCTTCTCGAGCCCCAGCGACACAAGCAGCCGG 422 Query 120475 TCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACC 120534 || || |||||||| ||||||| |||| | ||||||||||| | || | ||| Sbjct 421 TCTGCCACAAACTCGATGTACTGCGACATCAGTTCAGCGTTCATGCCGATCAGCCGCACA 362 Query 120535 GGCAACGCCGACGT-GAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGCGAG 120593 |||| ||| | || || ||||| |||||||| ||| || ||| || || | || Sbjct 361 GGCAGCGC-GTCGCAGATGAACTCGCGCTCAATGTTCACTGCATCCACGATGATCTCCAG 303 Query 120594 CATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGCAAAGTC 120653 | | | ||||| |||||| | |||| ||| |||| ||||||||||||||| Sbjct 302 AACGCGCTCACGGGGCAGCTTGTGCTTGATGTGCGAGTCGTAGAGCAGGCACGCAAAGTC 243 Query 120654 CGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGAT 120713 |||||||||||||||||| ||||| || ||||||||||| || ||||| |||||||| | Sbjct 242 CGTGTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTGCTGAAGGTCAGCCCGGGCATCAG 183 Query 120714 GCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCAC 120773 || | |||| | |||| | ||| || ||||||||||| | |||||| || Sbjct 182 CCCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCCGAAAAGAATATGCCCTCTAC 123 Query 120774 GATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCACTTCAT 120833 || ||| ||| || ||||| || | | || | |||| ||||||| | Sbjct 122 CGCAGCGAAGCCGATCAGCCGCTCCTGGAAGCTAG-CGCC--GCTGCCGATCCAACGTAC 66 Query 120834 GGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAGCAGC 120888 |||||||| ||||| || | | |||||| ||| || || ||||| ||||||| Sbjct 65 AGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCAGC 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483413452003840