Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq31 282 4e-71 >seq31 Length=128647 Score = 282 bits (312), Expect = 4e-71 Identities = 976/1482 (66%), Gaps = 59/1482 (4%) Strand=Plus/Minus Query 146866 TTAATGAGGTC-ATCAATTAAATACTGATTGACCACTTGAAACTCGCCCGCCAGCACACG 146924 || |||||||| |||| | ||||| |||||||| | |||||||| ||||||||| Sbjct 108627 TTGATGAGGTCCATCACG-AGATACTTGTTGACCACCGGGAACTCGCCGCTCAGCACACG 108569 Query 146925 TCTGAGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGC 146984 | | || | ||| ||||| ||||| || |||| || ||||| | || || | Sbjct 108568 GCGCACGTAGATGTTGGACGTGAAGGGCTCGAAGCACTCGTTGTTGCCGAGAATCTGCGA 108509 Query 146985 CGTGGTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCAGACCGTAC-GCACGGA 147043 |||| || || ||||| |||| || | || || |||| |||| | ||| | Sbjct 108508 GGTGGACGCTGTCGGCATCGGGGCCAGCAGAAGGGAGTTGCGCATACCGGTCTGCATC-A 108450 Query 147044 TGTTGTCCTTCAAAGTTTGCCAGTCCCA-CATCGAC-------GAGGGCGTCACGTTCCA 147095 || ||||| | | | ||||||||| | | || | ||| || ||||| Sbjct 108449 CCTTCTCCTTGAGGCTGTCCCAGTCCCAGCGGCCACTGTTCGGGCGGGGGTTC--TTCCA 108392 Query 147096 CATGTCGTACTGGAGCACTCCTCGACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCC 147155 ||||||| |||| || | || | ||||| || ||||| ||| || ||| || Sbjct 108391 CATGTCGAACTGCAGAATGCCCTGGCTGGCCGGGCTGCCCTTGAAGGTCTCGTACGCGCC 108332 Query 147156 GTCGCGCTGCGCCAATTC-ACAGCTTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGA 147214 || || ||||| || | || | ||||| | ||| || |||| || || || || Sbjct 108331 CTCCTCCTTCGCCATCTCCATAGAT-GCCTCCACCGCGGCAAAGTAGATCGTCTCAAAGA 108273 Query 147215 TTTGTTTGTTTAGGACGGT-CGCTTCTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAG 147273 | | || | || | ||| || ||||| | |||||| |||||| || | || Sbjct 108272 TCTCCGCATTCACC-CGCTGCGCCTCGGCGCTCACAAAAGGCAGACGCAGCAGAATGAAC 108214 Query 147274 GCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCGAT-GCTTTTCGTTGCTGCGCTT 147332 || || |||| ||||| | ||||| ||| || || || | || | ||||||||| Sbjct 108213 GCGTCTGCCAGGCCCTGCACACCGAGGCCAATGGGGCGGTTGCGCAT-GTTGCTGCGAAG 108155 Query 147333 CGCGCTCGCTATGGGATAGTGGTTGCGATCAATAATCTTGTTGAGGTTACGCACTACAAC 147392 ||| || | | ||| |||| |||||| || || | ||| ||||| || | Sbjct 108154 CGCCGTCTCAACGGGGTAGTAGTTGCGGTCGATCACACGGTTCAGGTTGCGTGTGATCTG 108095 Query 147393 TTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTCCCGTCTTCGACACGT--ACGCAT 147450 || || | || | ||| || | ||| | || || ||||| | ||| ||| | Sbjct 108094 CTTCGTGACAGTGTAGAGCAGCTTGTGATCG-ATCTCACG-CTTCGCCTCGTCGACGAAG 108037 Query 147451 TGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTC-GGCGTCGCTGTACTG 147509 || | ||||| || || || ||||| ||||| ||||| || |||| | |||||| Sbjct 108036 CGGGGTAGCGCGATGGAGGCAAGGTTGCACACGGCGGTCTCCTCCGGCGAGG-TGTACTC 107978 Query 147510 CACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTGCTGATT-GCTTT 147568 || || || | |||||||| ||| || ||| || | || | ||| || | || Sbjct 107977 AACTATCTCCGTACACAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTT 107918 Query 147569 TCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAA 147628 ||| ||||||||||| ||| | || ||| |||| |||| ||||| | |||| || | Sbjct 107917 GCCG-TTGCACGCGTCCTTGTACAGGATGAACGGCACGCCCGTCTCAATCTGCGACTCGA 107859 Query 147629 CGATA---AACCTATGCAGGTCCTGCGCTCGCACCCGCTGC-CGATAGCGGCCCTCGTTT 147684 |||| |||| || |||||||| | | |||| || | |||||||| Sbjct 107858 GGATAGCGAACCA---CACCTCCTGCGCCTGAATAGTCTGCACGCCA-CGGCCCTCCGCC 107803 Query 147685 TCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACAC 147744 ||||| ||||| || | ||||| ||||| ||||||||||| || | ||| ||||| Sbjct 107802 TCGTAGCGCTCATATAGGCGCTCGAACTCCTCGCCGTAGCAGTCACTCAAGCCCGGACAG 107743 Query 147745 TGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCC 147804 | ||| |||||||| |||| | | || || || || ||| ||||| || Sbjct 107742 GCGTTCGGGTCCATCAGCGTCCACTTCCCTTCGCTCTTCACACGCTTCATGAACAGGTCG 107683 Query 147805 GGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGT 147864 || |||||||| ||||| | ||||| ||||| || || ||| ||||||| Sbjct 107682 GGGACCCACAGGGCGTAGAACAGATCACGCGCACGCTGGTCGTCCTTGCCGGTGTTGCGC 107623 Query 147865 TTCAAATTAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCA 147924 |||| || | | | |||||||||||||||| || || | ||| ||||| | ||| Sbjct 107622 TTCAGGAGCAGAAAACCAAAGATGTCGGCGTGCCACGGCTCCAGGTACACGGCGAAAGCA 107563 Query 147925 CCTTTACGCTT---TCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACC 147981 || || ||||| || |||||||| || | ||| | ||||||| ||||| |||| | Sbjct 107562 CCCTTGCGCTTACCACCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAACACACGCAGC 107503 Query 147982 ATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGT----GGAATTGATCTTGCTGCCGCGGGC 148037 || ||| ||| ||| ||| |||||||| || | ||| | ||| | || ||| Sbjct 107502 ATCGGTACCAATCCGTTCGACGTGCCGTTCGTGCCGGCAATGTAGCTTCCAGCAGCG--- 107446 Query 148038 TCGCACTTCGTGCACGTTAACGCCAATGCCG-CCGCCGTACTTTGAT-ATGGCAGCGCAA 148095 || | | |||||||| | |||||||||| |||||| ||||| | ||| | || || Sbjct 107445 -CGGATATTGTGCACGTGCAGGCCAATGCCGCCCGCCG--CTTTGCTGATGACGGCACAC 107389 Query 148096 TCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACAC 148155 || || || ||| ||||||||||||||||||| || | | | | ||| || ||| Sbjct 107388 TCCTTCAGGGTGTCGTAAATGCCGTCGATGCTGTCGTCCTTCATGGCCACCAAGAAGCAC 107329 Query 148156 GAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAAC 148215 || | ||| ||||| || |||| || || ||| ||||| || | |||||||| || Sbjct 107328 GAGCTCATCTGCGGCTTCGGCGTGCCGGCGTTGAAGAGGGTTGGCGTGGCGTGCGTGAAG 107269 Query 148216 AAT--TTTTGAC-TCATCATGCGATACGTCTCAATAGCG-TCTTCGATGTCGTCGCCGTG 148271 ||| || ||| ||| || || |||||||| || ||||| | || | ||| Sbjct 107268 AATCCCTTCGACATCA--ATTCG-TACGTCTCGCGCACGTTCTTC-AAATCCCTGAGGTG 107213 Query 148272 AATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTC 148313 ||||| || ||||| |||| || || ||||| || || || Sbjct 107212 GATGCCGAGAGCGACACGCAGGAACAACTGCTGCGGCCGCTC 107171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476603955509760