Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq176 194 2e-44 >seq176 Length=55057 Score = 194 bits (214), Expect = 2e-44 Identities = 410/603 (68%), Gaps = 14/603 (2%) Strand=Plus/Plus Query 146908 AGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGC 146967 ||||| |||||| | ||| || || || ||||||||| || || ||||| |||||| Sbjct 8095 AGCTGCTCTTTCAGCGCCTCGACATGATTTCTGTAGACGTGAGCATCGCCCAGCGTGTGC 8154 Query 146968 ACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAG-GTGAGCAGCGAGTA 147026 || | || ||||| ||||| ||| | | || | || ||| || | || ||||| Sbjct 8155 ACCAGTTCACCCGGACGCAGGCCCGTCGCCTTCGCAATCA-GTATCGTCAAGAGGGAGTA 8213 Query 147027 GCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 ||| ||||||||||| || || ||||||||||| | ||| | |||||||||| ||| Sbjct 8214 CGAGGCGATGTTGAAGGGCACGCCAAGGCCCATGTCACACGAGCGCTGGTACAGCATGCA 8273 Query 147087 CGAGAGCTCC-------CCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCA 147139 ||||||||| |||| | |||||| ||||||| ||| | |||||| || |||| Sbjct 8274 TGAGAGCTCCGACTTTTCCGT-GTTCACGTAGAACTGGCCCAGTAAGTGGCAAGGGGGCA 8332 Query 147140 GCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTG-CTCTCG 147198 ||||||| || ||| | | |||||||| || || | || ||| | | | | | Sbjct 8333 GCGCCATCTTGGACAGCGCGGACGGGTTCCACGCGATGAAGAGCATCCGACGGTCGTTTG 8392 Query 147199 GGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAG 147258 | || || | | | ||| | | | | | | ||| |||||||||| || |||| Sbjct 8393 GATTTTCTTTGAGCGTGTTC-ACGATCATCTTGATCTGATCCACGCCCTCACCTTCGTAA 8451 Query 147259 TTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGC 147318 || | ||||| || |||| || |||||||| | ||||||||||||||| ||||| Sbjct 8452 TTCGCGTCGCAGCCCTTGTACTCCGCGCCAAAGTGGCGCCACTGGAAGCCGTAGACTGGG 8511 Query 147319 CCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGC-CCGCTTGAGAAACTCGGGGGACCC 147377 |||||||| ||| | | || | ||||||| | | || |||||| | || || Sbjct 8512 CCCAGGTCCATCTCCTTGTTCTCCGTG-AGCCCGCGGCTGTCAAGGAACTCGCGCGAGCC 8570 Query 147378 GTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCG 147437 || | | ||||||||| | ||||| ||| || || | || ||| || || Sbjct 8571 GTTGCCATCCCAGATGTGAATGTCCTTGTCGGCCAGGAGCTGGGCGTTCGTCTCACCACG 8630 Query 147438 GATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAG 147497 | |||||| | ||||||||| | || || | ||| || || | ||||| || ||||| Sbjct 8631 CAGGAACCATATCAGCTCCTCACAGACACCACGCCAGAACACACGTTTGGTCGTAAGCAG 8690 Query 147498 GGG 147500 || Sbjct 8691 CGG 8693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583479130982400