Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq14 239 6e-57 seq31 167 3e-35 seq7 147 3e-29 seq24 118 2e-20 seq221 98.7 1e-14 >seq14 Length=160581 Score = 239 bits (264), Expect = 6e-57 Identities = 414/595 (70%), Gaps = 9/595 (2%) Strand=Plus/Plus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 || ||| ||| ||||||||||||| ||||| || |||||||| ||| ||||| Sbjct 142867 GAACCGTTGCAGCGCGATAACCCGTTCCGCTACGTGCTGTTCCCGATCGTATACCACGAT 142926 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 || ||| | |||| || || ||| || | | ||||| |||||| ||||||| Sbjct 142927 ATCTGGCGCAAGTAC-AAGGAGCAGGAGAGCTGCATCTGGACGCTGGAGGAGATCGACCT 142985 Query 1455836 CGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCA 1455895 ||| ||||| | |||||| | | | | ||||| |||||| || ||||||||||| Sbjct 142986 GGGCAACGACATGAAGGACTGGGAGAAGTTAAACGACGGCGAGCGGCACTTCATCAAGCA 143045 Query 1455896 CGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCT 1455955 |||||| || |||||| || | ||||| |||||||| ||||||||| || |||| Sbjct 143046 CGTCCTTGCTTTTTTT-GCAGGGAGCGACGGCATCGTCATCGAGAACCTCGCGCAGCGCT 143104 Query 1455956 TTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCG 1456015 | |||| || || | |||| ||||| || || ||||| |||||| | || | Sbjct 143105 TCATGACCGACGTGAAGGTGCCGGAGGCGCGCGCCTTCTACGGCTTCCAGTTGATGATGG 143164 Query 1456016 AAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCG 1456075 | ||||||||||| || || |||||| | ||| | ||||| ||| ||| |||| | | Sbjct 143165 AGAACATCCACTCGGAGACGTACTCGGTGCTGCTTGACACGTACATCACGGACAGCGAGG 143224 Query 1456076 AGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACT 1456135 ||||| | || | | ||| ||| | ||| | |||| || ||| ||||| || | Sbjct 143225 AGAAGCTGCGGCTGCTGCACGCAATCCAGACGATCCCGTGCGTTCAGAAGAAGGCGGAGT 143284 Query 1456136 GGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTT 1456195 |||| || |||||| |||| | ||| ||| |||||||| ||||||| Sbjct 143285 GGGCTGTGCGTTGGATC----GGGAGCCGCGCGA-GCTTCCAGGAGCGGCTGATCGGCTT 143339 Query 1456196 TGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAA 1456254 ||||| || |||||||| || ||||| || |||||||| | || ||||| ||||| Sbjct 143340 CGCCGCGGTTGAGGGCATATTCTTCTCCGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAA 143399 Query 1456255 GCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 |||||| || |||||||| | | ||| |||||||| | ||| || ||||| Sbjct 143400 GCGCGGGCTGATGCCCGGGC-TGACCTTCAGCAACGAGCTCATCTCGCGTGACGA 143453 Score = 111 bits (122), Expect = 2e-18 Identities = 163/224 (73%), Gaps = 9/224 (4%) Strand=Plus/Plus Query 1456521 AGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGG 1456580 |||||||||| || || || | || ||| ||||| || |||| ||||||| ||| Sbjct 143531 AGATCATCGTGGACGCGGTGAACATTGAGCGCGAGTTCATCTGCGACGCGCTGCCTGTGC 143590 Query 1456581 CGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCG 1456640 | | ||||||||||||| | || |||| |||||||| || ||| || || ||||| Sbjct 143591 GGTTGGTCGGCATGAACGCGGAC-CTGATGTCGCAGTACATCGAGTTT-GTGGCGGACCG 143648 Query 1456641 CCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTAC--CG-GACGGCCAACCCGTTCCCAT 1456697 ||||| | | |||| || || ||||||||||| || |||| | |||||| | Sbjct 143649 GCTGCTTGTGTCGCTGGGGCTCG-AGAAGCACTACAACGTGACG---CAGCCGTTCGACT 143704 Query 1456698 GGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 |||||| |||||||||| | |||||||| ||||| |||||| Sbjct 143705 TCATGGAGATGATCTCGCTGCAAGGCAAGACGAACTTCTTCGAG 143748 >seq31 Length=128647 Score = 167 bits (184), Expect = 3e-35 Identities = 227/317 (72%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 259866 TGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACGC 259925 || || |||||| || || ||||| |||||| || || ||||| || |||| Sbjct 107226 TGAAGAACGTGCGCGAGACGTACGAATTGATGTCGAAGGGATTCTTCACGCACGCCACGC 107285 Query 259926 CCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACA 259985 | || ||||| || |||||||||||| ||||||| |||||||| || ||| || Sbjct 107286 CAACCCTCTTCAACGCCGGCACGCCGAAGCCGCAGATGAGCTCGTGCTTCTTGGTGGCCA 107345 Query 259986 TGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCA 260045 |||||| ||| ||||| ||||| || ||||| || ||| |||| || ||||| || Sbjct 107346 TGAAGGACGACAGCATCGACGGCATTTACGACACCCTGAAGGAGTGTGCCGTCATCAGCA 107405 Query 260046 AGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGG 260105 | ||||| |||||||| || | || ||||| | ||||| || || |||| | | Sbjct 107406 AAGCGGCGGGCGGCATTGGCCTGCACGTGCACAATATCCGCGCTGCTGGAAGCTACATTG 107465 Query 260106 CGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGG 260165 | ||||| |||||| ||| ||||| | || || ||||| || || || ||| |||| | Sbjct 107466 CCGGCACGAACGGCACGTCGAACGGATTGGTACCGATGCTGCGTGTGTTCAACAACACCG 107525 Query 260166 CGCGCTACGTCGACCAG 260182 | |||||||| |||||| Sbjct 107526 CCCGCTACGTGGACCAG 107542 Score = 102 bits (112), Expect = 1e-15 Identities = 357/545 (66%), Gaps = 18/545 (3%) Strand=Plus/Plus Query 262870 AGCGGCCGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGACAGCATGGCCTGCGCAAC 262929 || |||||||||||||||||| || || | ||| ||| || |||||||| Sbjct 108413 AGTGGCCGCTGGGACTGGGACAGCCTCAAGGAGAAGGTGATGCAGACCGGTATGCGCAAC 108472 Query 262930 TCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAG 262989 || | || |||| | ||||| || || | || |||||||| || ||||||| |||| Sbjct 108473 TCCCTTCTGCTGGCCCCGATGCCGACAGCGTCCACCTCGCAGATTCTCGGCAACAACGAG 108532 Query 262990 GCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACC 263049 |||||| | ||||| |||||||||| |||||| ||||| ||||| || | Sbjct 108533 TGCTTCGAGCCCTTCACGTCCAACATCTACGTGCGCCGTGTGCTGAGCGGCGAGTTCCCG 108592 Query 263050 GTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGAC-TT 263108 ||||||||| | || || | | | | | |||||| ||||||| | ||| | Sbjct 108593 GTGGTCAACAAGTATCTCGTGATGGACCTCATCAAGCGCGGACTGTGGA-ACGAGACGAT 108651 Query 263109 TCGCGACCGGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCC 263168 ||| | | ||| | | | || || | | | || | ||||| | | | || Sbjct 108652 GCGCAATGAAATTATTACCCTAAACGGGTCTAT-CTTGTCTAT--CGACG-GCA--TCCC 108705 Query 263169 GCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTGA 263228 | || || |||| |||| | |||||||||||| | || | || | || || Sbjct 108706 CCAAGACCTTAAGGAGCTCTACCGCACCGTGTGGGAGATCCCTCAGCGCAAGCTGATCGA 108765 Query 263229 TATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGC 263288 ||||| |||||||| | || | ||||| |||||||| ||||||| ||| || Sbjct 108766 CATGGCCCGCGACCGCGGTCAGTACATTGACCAATCGCAGTCGCTGAACCTGTTCCT-GC 108824 Query 263289 CG-ACCCGAC----GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGC 263343 | |||| || |||| || ||||||||||||| ||| | ||| | ||| Sbjct 108825 AGAACCCCACCTCTGGCC-AG---ATCACGTCGATGCTTTTCTACACCTGGGAGTGTGGC 108880 Query 263344 CTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACC 263403 |||||||| || ||||||| |||||||| | | |||||| | || || | ||||| Sbjct 108881 CTCAAGACCGGTGTGTACTACCTGCGCACGAAGGCGGCTGCCGATGCGATCAAGTTCACG 108940 Query 263404 GTCGA 263408 || || Sbjct 108941 GTGGA 108945 >seq7 Length=230934 Score = 147 bits (162), Expect = 3e-29 Identities = 316/463 (68%), Gaps = 11/463 (2%) Strand=Plus/Minus Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCTTGGT 1600317 ||||||||| |||| ||| | |||||| | ||| ||| ||||| |||||| Sbjct 200777 CTCCATCTCACCAAAGCGCAGACCGCCCTCGTGCGCGCGACCCTCTGTCGGCTGGCGCAC 200718 Query 1600318 GAGCATCTGGACGGGGCCGCGTGGTCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCAG 1600377 ||| ||| | || |||||||| |||||||||||||| || | || ||| || Sbjct 200717 CAGCGGCTGCAGCGGTCCGCGTGGGCGGGCGTGAATCTTATCCCCTGACAAGTGCTTGAG 200658 Query 1600378 GGCCTGGTAGTAGACCGGCGCCGTA-AAGATCAACGCCTCCATGGGCTCGCCGGTGTGCG 1600436 | ||||||| || || |||| | ||||| | |||| || |||||||| Sbjct 200657 GCGCTGGTAGAAGGTGGG-GCCGAAGAAGATGAGGTGGTCCAGCGGGAGACCGGTGTGGC 200599 Query 1600437 GGTGGTAGAGCACCTCCTTGCCGTAGCGCT-CGCATCCGTGGCGAGCCAACTCGGCGGCG 1600495 || |||||| ||| ||||||||||||| || | |||| || | | | | || Sbjct 200598 CGTTGTAGAGGCACTCGTTGCCGTAGCGCTGCGACTTGAGGGCGTGC-AGCGCCTTGCCG 200540 Query 1600496 ACATCGTCGACGGTGACGCCGCCAAAGGGCGTGCCGTCGCCCACATAGCCCTCGCGGCAG 1600555 | |||||| || |||| || ||||||||| ||| | || || ||||| | |||| Sbjct 200539 AAATCGTCCACCACGACGGAGCAGAAGGGCGTGGCGTAGACCTCACCGCCCTTGTAGCAG 200480 Query 1600556 GCCACCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGGGATGGCG 1600615 ||||||||||| ||| | ||| |||| | | ||| |||||||| || || ||||| Sbjct 200479 GCCACCTTGCCTGCGAGCGTCTCGATCAGGTGGGCCACCGTCATGCGGGAGGGAATGGCA 200420 Query 1600616 TGCGGGTTGATCACAATGTCGGGCGTGGCACCGCCGCGAGGCGACCAGGGCATGTCCTC- 1600674 || |||||||| | | ||| ||| | | ||| | || | || ||||||||||||| Sbjct 200419 TGGGGGTTGATAATGAGGTCCGGCACGACGCCGTCACG-GTTGA--AGGGCATGTCCTCC 200363 Query 1600675 -GGTGGAGCGCACGCTGCCCACGGTGCCCTTTTGGCCGTGGCG 1600716 || ||| | | |||| ||||||||| || |||||||| Sbjct 200362 TGGCGGAACTGA--ATGCCGTTGGTGCCCTTCTGCCCGTGGCG 200322 Score = 105 bits (116), Expect = 1e-16 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 1601274 GCACCAGCGGCACCTGCGGGTAGCACAGGGCGTGCGACACCGTGTCGATG-GCATGGTCG 1601332 ||||||||||| |||||||||| | ||| |||||| ||||| ||| ||||| | | Sbjct 199791 GCACCAGCGGCTTCTGCGGGTAGAAGAGGACGTGCGCGGTGGTGTCCATGCGCATGTT-G 199733 Query 1601333 GCGTTGAGCGACACGACGGCCTTGCTCTGCTTGCCCATGGCCGTCTGGTAGATGTTGCGC 1601392 |||| | || | || || |||||| ||||| || | |||||| |||||||| Sbjct 199732 AAGTTGGAGGCGTAGATGCCCATGGCCTGCTTACCCATAGCGGATTGGTAGGTGTTGCGC 199673 Query 1601393 GGCGCCTGGTTGTGGTTGGAAAACGGGATGATGGACGCGCAGGCGCCCAGCATGAGCAGC 1601452 || | |||||||||||| | | | || ||||||||||||||| ||| || || | | | Sbjct 199672 GGGGACTGGTTGTGGTTCGGATAGGGAATGATGGACGCGCAGATGCCGAGGATCATCGAC 199613 Query 1601453 GGGTGGACCTCG 1601464 |||| | |||| Sbjct 199612 GGGTCCATCTCG 199601 >seq24 Length=140537 Score = 118 bits (130), Expect = 2e-20 Identities = 161/221 (73%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 1456521 AGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGG 1456580 |||||||||| || || || | || ||| ||||| || |||| ||||||| ||| Sbjct 307 AGATCATCGTGGATGCAGTGAACATTGAGCGCGAGTTCATCTGCGACGCGCTGCCTGTGC 366 Query 1456581 CGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCG 1456640 ||| ||||||||||||| | || |||| |||||||| | | ||||| || ||||| Sbjct 367 GGCTGATCGGCATGAACG-CTGAACTGATGTCGCAGTACATCG-AGTTTGTGGCAGACCG 424 Query 1456641 CCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGA 1456700 ||||| | | |||| || | |||||||||||| ||| | |||||| | | Sbjct 425 GCTGCTTGTGTCGCTGGGGCTC-GAGAAGCACTACAACGTGGCGCAGCCGTTCGACTTCA 483 Query 1456701 TGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 ||||| |||||||||| | |||||||| ||||| |||||| Sbjct 484 TGGAGATGATCTCGCTGCAAGGCAAGACGAACTTCTTCGAG 524 >seq221 Length=45055 Score = 98.7 bits (108), Expect = 1e-14 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 1818082 TCACGCGCTCGGGAAAGGTGAGCGTCTTGACGATCTCATAGGGCACGCCCACCTCGTCAA 1818141 |||| ||||||||||| || |||||| || | || | | || ||||| |||||||| | Sbjct 18343 TCACCCGCTCGGGAAACGTCAGCGTCATGGCTATGGAAAATGGAACGCCGACCTCGTCGA 18284 Query 1818142 TGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGTAAAGTTGACGCGCTTGCCCA 1818201 ||| || | ||||| | ||||||| | |||||||| |||| || |||||||||| Sbjct 18283 CGTCGATGTTCGGGTCACCGGTGATGACCGTGCGCGCGGAGAAGTCAACCCGCTTGCCCA 18224 Query 1818202 TGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGAACCGCTCC 1818245 | | ||||| || | | || | ||| ||||||| |||||| Sbjct 18223 TCAAGTTGCCACGCAGACGTCCATACTTACCCTTGAGGCGCTCC 18180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177693914564992