Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq31 93.3 1e-13 seq14 93.3 1e-13 seq24 89.7 2e-12 >seq31 Length=128647 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 254979 TACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAAC 255038 |||| ||| | ||||||||||||||| || |||||||| || || || || || || | Sbjct 107496 TACCGATGCTGCGTGTGTTCAACAACACCGCCCGCTACGTGGACCAGGGTGGTGGTAAGC 107555 Query 255039 GCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACAT 255084 || || || ||| || | |||||||||||||||||||||||||| Sbjct 107556 GCAAGGGTGCTTTCGCCGTGTACCTGGAGCCGTGGCACGCCGACAT 107601 >seq14 Length=160581 Score = 93.3 bits (102), Expect = 1e-13 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 443770 TTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGT 443829 |||||| |||| ||||| || || |||| ||| |||||||| || ||||| || ||| Sbjct 143386 TTCTGGCTGAAGAAGCGCGGGCTGATGCCCGGGCTGACCTTCAGCAACGAGCTCATCTCG 143445 Query 443830 CGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACCAAACACATCGTGCAC 443889 || |||||||| |||| |||||||| || || |||||| | |||||| |||| Sbjct 143446 CGTGACGAGGGCCTGCACACGGACTTCGCGTGCCTCCTCTACGACTCGCACATCAAGCAC 143505 Query 443890 AAGCTGCCC 443898 ||||||||| Sbjct 143506 AAGCTGCCC 143514 >seq24 Length=140537 Score = 89.7 bits (98), Expect = 2e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 443770 TTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGT 443829 |||||| |||| ||||| || || |||| ||| |||||||| || ||||| || ||| Sbjct 162 TTCTGGCTGAAGAAGCGCGGGCTGATGCCCGGGCTGACCTTCAGCAACGAGCTCATCTCG 221 Query 443830 CGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACCAAACACATCGTGCAC 443889 || |||||||| |||| ||||| || || || |||||| | |||||| |||| Sbjct 222 CGTGACGAGGGCCTGCACACGGACTTTGCGTGCCTGCTCTACGACTCGCACATCAAGCAC 281 Query 443890 AAGCTGCCC 443898 ||||||||| Sbjct 282 AAGCTGCCC 290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588311253725120