Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq24 127 3e-24 seq14 113 6e-20 >seq24 Length=140537 Score = 127 bits (140), Expect = 3e-24 Identities = 278/402 (69%), Gaps = 22/402 (5%) Strand=Plus/Minus Query 129858 ACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTT-ACATGGGAGCGCG 129916 |||| ||||||| |||||| || | |||||| ||||| || ||| || |||||| Sbjct 411 ACTCGATGTACTGCGACATCAGTTCAGCGTTCATGCCGATCAGCCGCACA-GGCAGCGCG 353 Query 129917 TCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAATGGTCTC- 129975 || |||||||| | |||||||| ||| || ||| | ||| | ||| | ||| Sbjct 352 TCGCAGATGAACTCGCGCTCAATGTTCACTGCATCCACGATGATCTCCAGAACGCGCTCA 293 Query 129976 CGTGCCAGGT----CT--AT-TGCGCAAAGTCTTGAAG-AGTTCCACGGCAAACTCCTGG 130027 || | ||| | || || |||| |||| | || || |||| |||| ||| | Sbjct 292 CGGGGCAGCTTGTGCTTGATGTGCG---AGTCGTAGAGCAGG--CACG-CAAAGTCCGTG 239 Query 130028 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 130087 || || ||||||||||| |||||||| || || |||| ||| || ||||| || || Sbjct 238 TGCAGGCCCTCGTCACGCGAGATGAGCTCGTTGCTGAAGGTCAGCCCGGGCATCAGCCCG 179 Query 130088 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 130147 |||||||||| |||||| | ||| || || || || || ||||| || ||||| || Sbjct 178 CGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCCGAAAAGAATATGCCCTCTACCGCA 119 Query 130148 GCGAACGCAAAGAGACGCT-CAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGC 130206 ||||| | | || |||| | | || |||| || ||| ||| | || || Sbjct 118 GCGAAGCCGATCAGCCGCTCCTGGAAGCTAGCGCCGCTGCCGATCCAAC--GTACA--GC 63 Query 130207 CCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248 ||||| |||||| |||| ||| ||||||| ||||||||||| Sbjct 62 CCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGC 21 >seq14 Length=160581 Score = 113 bits (124), Expect = 6e-20 Identities = 285/421 (68%), Gaps = 22/421 (5%) Strand=Plus/Minus Query 129839 AGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATG 129898 || || || |||| || |||| ||||||| |||||| || | |||||| |||| Sbjct 143654 AGCAGCCGGTCCGCCACAAACTCGATGTACTGCGACATCAGGTCCGCGTTCATGCCGACC 143595 Query 129899 AGGTT-ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCAC 129957 | ||| || |||||||| |||||||| | |||||||| ||| || ||| | Sbjct 143594 AACCGCACA-GGCAGCGCGTCGCAGATGAACTCGCGCTCAATGTTCACCGCGTCCACGAT 143536 Query 129958 GATGGCGTGAATGGTCTC-CGTGCCAGGT----CT--AT-TGCGCAAAGTCTT-GAAGAG 130008 ||| | ||| | ||| || | ||| | || || |||| |||| | || ||| Sbjct 143535 GATCTCCAGAACGCGCTCACGGGGCAGCTTGTGCTTGATGTGCG---AGTCGTAGAGGAG 143479 Query 130009 TTCCACGGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCA 130068 |||| | || ||| ||| || ||||||||||| |||||||| || || |||| Sbjct 143478 G--CACG-CGAAGTCCGTGTGCAGGCCCTCGTCACGCGAGATGAGCTCGTTGCTGAAGGT 143422 Query 130069 CAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAA 130128 ||| || ||||| || || |||||||||| |||||| | ||| || || || || ||||| Sbjct 143421 CAGCCCGGGCATCAGCCCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCGGAGAA 143362 Query 130129 GAAGATCCCCTCCACACACGCGAACGCAAAGAGACGCT-CAGCAAAGGAGCGGGACTTTG 130187 ||| || ||||| || ||||| | | || |||| | | || ||| | || Sbjct 143361 GAATATGCCCTCAACCGCGGCGAAGCCGATCAGCCGCTCCTGGAAGCTCGCGCGGCTCCC 143302 Query 130188 TATCAAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCG 130247 ||| ||| || ||||||| |||||| |||| | ||||||| |||||||| | Sbjct 143301 GATCCAAC----GCACAGCCCACTCCGCCTTCTTCTGAACGCACGGGATCGTCTGGATTG 143246 Query 130248 C 130248 | Sbjct 143245 C 143245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618425799784960