Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq14 109 6e-19 seq24 96.9 4e-15 >seq14 Length=160581 Score = 109 bits (120), Expect = 6e-19 Identities = 186/268 (69%), Gaps = 5/268 (2%) Strand=Plus/Plus Query 94678 GACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTT 94737 |||| ||| || | ||| | | |||||| || ||| | | || ||||| || | Sbjct 143200 GACACGTACATCACGGACAGCGAGGAGAAGCTGCGGCTGCTGCACGCAATCCAGACGATC 143259 Query 94738 CCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCC 94797 ||||| |||| ||||| ||||| |||||| || ||| ||| || |||| Sbjct 143260 CCGTGCGTTCAGAAGAAGGCGGAGTGGGCTGTGC----GTTGGATCGGGAGCCGCGCGAG 143315 Query 94798 TTTGCTG-AGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 94856 || | | |||| || ||| || || |||||||| || |||||||| || || || Sbjct 143316 CTTCCAGGAGCGGCTGATCGGCTTCGCCGCGGTTGAGGGCATATTCTTCTCCGGGTCGTT 143375 Query 94857 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 94916 |||||| | | ||||| |||||||| || || ||||| || || |||| |||||| Sbjct 143376 CTGCGCGCTGTTCTGGCTGAAGAAGCGCGGGCTGATGCCCGGGCTGACCTTCAGCAACGA 143435 Query 94917 GCTTATCTCTCGTGACGAGGGACTCCAC 94944 ||| ||||| ||||||||||| || ||| Sbjct 143436 GCTCATCTCGCGTGACGAGGGCCTGCAC 143463 >seq24 Length=140537 Score = 96.9 bits (106), Expect = 4e-15 Identities = 163/234 (70%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 94723 GCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 94782 || ||||| || | ||||| || || ||||| ||||| |||||| | ||| | | Sbjct 21 GCGATCCAGACGATCCCGTGCATCCAGAAGAAGGCGGAGTGGGCTGTACGTTGGATCGG- 79 Query 94783 ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTC 94842 || | ||| | ||| ||||| || ||| || || || ||||| || ||| Sbjct 80 -CAGCGGCGC-TAGCTTCCAGGAGCGGCTGATCGGCTTCGCTGCGGTAGAGGGCATATTC 137 Query 94843 TTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTC 94902 || || || || |||||||| | | ||||| |||||||| || || ||||| || || Sbjct 138 TTTTCGGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGGCTGATGCCCGGGCTG 197 Query 94903 TGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 94956 |||| ||||||||| ||||| ||||||||||| || ||| || |||||| Sbjct 198 ACCTTCAGCAACGAGCTCATCTCGCGTGACGAGGGCCTGCACACGGACTTTGCG 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583251934435840