Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq206 96.9 1e-14 >seq206 Length=48879 Score = 96.9 bits (106), Expect = 1e-14 Identities = 248/377 (66%), Gaps = 3/377 (1%) Strand=Plus/Minus Query 349526 TTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCA 349585 || || ||||||||||| || | ||||| | || |||||||| | ||||| || Sbjct 3606 TTCTTCCCCGAAGAAATCTCCGCGATGGTGCTGCAAAAGATGAAGGAGACGGCTGAGGCG 3547 Query 349586 TATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCC 349645 || | || | || | || || || | || || || ||||| || || || || Sbjct 3546 TACCTCGGAACGGCGGTCAAGGACGCCGTGGTGACGGTGCCGGCCTACTTCAACGACTCC 3487 Query 349646 CAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATT 349705 |||||| || || || || || ||| ||| ||||| | || || || | || || Sbjct 3486 CAGCGTCAGGCGACGAAGGACGCAGGCTCCATCGCGGGCCTCAACGTGCTGCGCATCATC 3427 Query 349706 AATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAG---aa 349762 || || || || || || || || || || || | || | || || ||| | Sbjct 3426 AACGAGCCGACCGCCGCCGCCATCGCGTACGGAATGGACCGCAAGAACGATAAAGGTGAG 3367 Query 349763 aaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTT 349822 || || | || || || ||| | ||||| ||||| |||||||| | || | || | Sbjct 3366 AAGAACGTGCTGATCTTCGATCTGGGTGGCGGTACGTTTGATGTGACGCTGTTGACGATC 3307 Query 349823 GAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGAT 349882 |||| || | || || || || || || ||||||||||| ||||| ||||| || || Sbjct 3306 GAAGGCGGCGTCTTCGAGGTGAAGGCCACGGCTGGTGATACCCATCTCGGTGGCGAGGAC 3247 Query 349883 TTTGATAATCGTCTCGT 349899 || ||||| || ||||| Sbjct 3246 TTCGATAACCGCCTCGT 3230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515230792336448