Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq31 210 2e-49 >seq31 Length=128647 Score = 210 bits (232), Expect = 2e-49 Identities = 772/1182 (65%), Gaps = 63/1182 (5%) Strand=Plus/Minus Query 80541 CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGG 80600 |||||||||| ||||| ||||||| ||||| ||| ||| |||||||||| Sbjct 108394 CCACATGTCGAACTGCAGAATGCCCTGGCTGGCCGGGCTGCCCTTGAAGGTCTCGTACGC 108335 Query 80601 GCCCTCCGTCTTGGCCAGCTC---ACACGACTCCATAAGGGCCGCGTGA---TAAATGCA 80654 ||||||| ||| |||| ||| | | | ||||| ||||| | || || Sbjct 108334 GCCCTCCTCCTTCGCCATCTCCATAGATGCCTCCA------CCGCGGCAAAGTAGATCGT 108281 Query 80655 CTCAAAGACGCCCTTGTTCACACCGC-GCGCCTGTGGGTCGTCGAACGACAAGCCCATCA 80713 |||||||| || ||||| |||| |||||| | | | || | || | || || Sbjct 108280 CTCAAAGATCTCCGCATTCAC-CCGCTGCGCCTCGGCGCTCACAAAAGGCAGACGCAGCA 108222 Query 80714 TCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTT-- 80771 |||||| |||| ||||||||||| || |||| | | || ||||||| |||| |||| Sbjct 108221 GAATGAACGCGTCTGCCAGGCCCTGCACACCGAGGCCAATGGGGCGGTTGCGCATGTTGC 108162 Query 80772 --CGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTG 80829 ||| || | | ||| || ||||| |||| ||||| || |||||||||||| Sbjct 108161 TGCGAA-GCGCCGTCTC---AACGGGGTAGTAGTTGCGGTCGATCACACGGTTCAGGTTG 108106 Query 80830 CGTGTAACAACCCGTGTAACATCAT---GAAGTTTCTGAAAGTCGAATT---GGTTCCCC 80883 ||||| | | || ||| | | || || ||| |||| | | ||| || Sbjct 108105 CGTGTGATCTGCTTCGTGACAGTGTAGAGCAGCTTGTGA---TCGATCTCACGCTTCGCC 108049 Query 80884 T--TC-ACAAATGCCGGAAGGCTC-AGGGACGCCAGATTGCACACGGCCACCTCTTCAGC 80939 | || || || || || || | | ||| || || ||||||||||| ||| || | Sbjct 108048 TCGTCGACGAA-GCGGGGTAGCGCGATGGAGGCAAGGTTGCACACGGCGGTCTCCTCCGG 107990 Query 80940 ATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTT 80999 || |||| || || ||||| |||| || || |||| || || || ||||| || Sbjct 107989 CGAGGTGTACTCAACTATCTCCGTACACAGGTTCGAGCACTTGATGGTGCCGAGGTTCTT 107930 Query 81000 CTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGAC 81059 |||||| |||||| ||||||| ||||||||||| ||| |||| || ||||| | Sbjct 107929 CTGGTTCGACTTGCCGTTGCACGCGTCCTTGTACAGGATGAACGGCACGCCCGTCTCAAT 107870 Query 81060 CTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGC-GGAATTTGC 81118 ||| |||| |||||| ||| ||| | ||| ||||| ||| | ||| | || Sbjct 107869 CTGCGACTCGAGGATAGCGAACCACACCTCCTGCGCC-TGAATAGTCTGCACGCCACGGC 107811 Query 81119 CTTCGGCCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAG 81176 | || ||| | || | || || | ||||||| | |||| | || ||| | | Sbjct 107810 CCTCCGCCTCGTAGCGCTCATATAGGCGC-TCGAACTCCTCGCCGTAGCAG-TCACTCAA 107753 Query 81177 GTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCAT 81236 | | || || |||| ||| |||||| ||| | ||| ||| ||| |||||| Sbjct 107752 GCCCGGACAGGCGTTCGGGTCCATCAGCGTCCACTTCCCTTCGCTCTTCACACGCTTCAT 107693 Query 81237 GAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCAC 81295 ||| ||| |||| ||| |||||| |||||| || || ||| ||| || || | | Sbjct 107692 GAACAGGTCGGGGACCCACAGGGCGTAGAACAGATCACGCGCA-CGCTGGTCGTCCTTGC 107634 Query 81296 CCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACA 81355 | |||| | || ||||| | | |||||| || ||||| |||||||| |||| Sbjct 107633 CGGTGTTGCGCTTCAGGAGCAGAAAACCAAAGATGTCGGCGTGCCACGGCTCCAGGTACA 107574 Query 81356 CGGCGATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAA 81412 |||||| | |||||||| || |||||||||| ||||| ||||| || ||| | Sbjct 107573 CGGCGAAAGCACCCTTGCGCTTACCACCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGA 107514 Query 81413 ATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACC 81472 | ||||||| ||| || | | || | ||| |||||||| || | || | Sbjct 107513 ACACACGCAGCATCGGTACCAATCCGTTCGACGTGCCGTTCGTGCCGGCAATGTAGCTTC 107454 Query 81473 CCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGA- 81531 | ||||| | ||| | || || ||||| || | || ||||| |||| Sbjct 107453 CAGCAGCGCGGATATTGTGCACGTGCAGGCCAATGCCGCCCG-CCGCTTTG----CTGAT 107399 Query 81532 ----GCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAG 81587 |||||| |||| ||| || ||||| || |||||||| || | |||||| | | Sbjct 107398 GACGGCACACTCCTTCAGGGTGTCGTAAATGCCGTCGATGCTGTCGTCCTTCATGGCCAC 107339 Query 81588 CAAGAAAC---AGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGT 81644 |||||| | |||| |||||| || | | |||||| ||||| || ||||| || Sbjct 107338 CAAGAAGCACGAGCT---CATCTGCGGCTTCGGCGTGCCGGCGTTGAAGAGGGTTGGCGT 107282 Query 81645 CGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTC 81686 ||||| |||| | | || ||||||| || || || || Sbjct 107281 GGCGTGCGTGAAGAATCCCTTCGACATCAATTCGTACGTCTC 107240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570301731281920