Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq7 105 5e-18 seq176 104 2e-17 >seq7 Length=230934 Score = 105 bits (116), Expect = 5e-18 Identities = 134/180 (74%), Gaps = 6/180 (3%) Strand=Plus/Plus Query 53497 CAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTT-TGCATCCTTCA 53555 |||||||| | | | ||| || | ||| | || ||||||||||| |||| || || Sbjct 200267 CAAGGTGAAGATCCGCACCATCAAGATCCCCAACATCGGCGACAAGTTCTGCAGCCGCCA 200326 Query 53556 CGGCGCAAAAGGGGACATGCGGAG--CGGTCCTGACTCAGGAGGACATGCCCTTCGACAA 53613 ||| ||| ||||| || ||| | || | | | ||||||||||||||||| || Sbjct 200327 CGG-GCAGAAGGGCACCAACGGCATTCAGTTCCGCC--AGGAGGACATGCCCTTCAACCG 200383 Query 53614 GGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGACGGT 53673 ||||| || ||||| |||||||| ||||||||||| ||| |||||||| | |||||||| Sbjct 200384 TGACGGCGTCGTGCCGGACCTCATTATCAACCCCCATGCCATTCCCTCCCGCATGACGGT 200443 >seq176 Length=55057 Score = 104 bits (114), Expect = 2e-17 Identities = 154/215 (72%), Gaps = 10/215 (5%) Strand=Plus/Plus Query 29668 GTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTG 29727 ||||||||||||||| ||||| ||||| || | || ||||| || || || | | Sbjct 8127 GTAGACGTGAGCATCGCCCAGCGTGTGCACCAGTTCACCCGGACGCAGGCCCGTCGCCTT 8186 Query 29728 AGCCATCATGTA-CGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCA 29786 || |||| ||| ||| | ||| ||||| ||||||||| |||||||| || || |||| Sbjct 8187 CGCAATCA-GTATCGTCAAGAGGGAGTACGAGGCGATGTTGAAGGGCACGCCAAGGCCCA 8245 Query 29787 TGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTC-------TCCGTCGCTCACGTAA 29839 |||| | || | |||||| ||| ||| |||||||| ||||| | ||||||| Sbjct 8246 TGTCACACGAGCGCTGGTACAGCATGCATGAGAGCTCCGACTTTTCCGT-GTTCACGTAG 8304 Query 29840 AACTGACACATGGCATGGCACGGAGGAAGGGCCAT 29874 ||||| | || ||||| || || || ||||| Sbjct 8305 AACTGGCCCAGTAAGTGGCAAGGGGGCAGCGCCAT 8339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406157180661376