Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptomonas_20seymouri_20[genbank_20GCA_5F001299535.1_202015-09-25] 1,216 sequences; 27,764,161 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq24 95.1 3e-14 seq14 91.5 3e-13 >seq24 Length=140537 Score = 95.1 bits (104), Expect = 3e-14 Identities = 149/212 (70%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 230193 GAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGG 230252 |||||||| |||||||| | ||| || || ||||||||||| ||||| || ||| | Sbjct 339 GAGTTCATCTGCGACGCGCTGCCTGTGCGGCTGATCGGCATGAACGCTGAACTGATGTCG 398 Query 230253 CAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTAT 230312 || || ||||| || || || || || | | ||| |||| ||| |||||| || Sbjct 399 CAGTACATCGAGTTTGTGGCAGACCGGCTGCTTGTGTCGCTGGGGCTCGAGAAGCACTAC 458 Query 230313 AACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTC 230372 ||| | | || |||| || |||||| | || || || || || || || |||||| Sbjct 459 AACGTGGCGCAGCCGTTCGACTTCATGGAGATGATCTCGCTGCAAGGCAAGACGAACTTC 518 Query 230373 TTCGAAAAGCGTGTCAGCGATTATCA-AAGGC 230403 ||||| ||| ||| | || ||||| ||||| Sbjct 519 TTCGAGAAGAAGGTCGGTGAGTATCAGAAGGC 550 >seq14 Length=160581 Score = 91.5 bits (100), Expect = 3e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 230193 GAGTTCATTTGCGACGCTATTCCT-TGCCGTCTTATCGGCATGAATGCTGATCTCATGGG 230251 |||||||| |||||||| | ||| ||| || | |||||||||| || || || ||| Sbjct 143563 GAGTTCATCTGCGACGCGCTGCCTGTGCGGT-TGGTCGGCATGAACGCGGACCTGATGTC 143621 Query 230252 GCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTA 230311 ||| || ||||| || || || || || | | ||| |||| ||| |||||| || Sbjct 143622 GCAGTACATCGAGTTTGTGGCGGACCGGCTGCTTGTGTCGCTGGGGCTCGAGAAGCACTA 143681 Query 230312 TAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTT 230371 ||| | | | || |||| || |||||| | || || || || || || || ||||| Sbjct 143682 CAACGTGACGCAGCCGTTCGACTTCATGGAGATGATCTCGCTGCAAGGCAAGACGAACTT 143741 Query 230372 CTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 |||||| ||| ||| | || ||||| | | | ||||| Sbjct 143742 CTTCGAGAAGAAGGTCGGTGAGTATCAGAAGGCTGGTGT 143780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046722891803264