Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotmaria_20passim_20[genbank_20GCA_5F000635995.1_202014-04-22] 2,801 sequences; 32,812,984 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2353 82.4 7e-11 seq913 82.4 7e-11 >seq2353 Length=17035 Score = 82.4 bits (90), Expect = 7e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 115617 GGTGAGGATCGAACTCACAACCTTGGCATTATAAGTACCACGCGCTGCCGATTGCGCTAC 115676 |||||||||||||||||| ||||||| ||||| || |||||||||||||| |||||||| Sbjct 487 GGTGAGGATCGAACTCACGACCTTGGGATTATGAGACCCACGCGCTGCCGACTGCGCTAC 428 >seq913 Length=43295 Score = 82.4 bits (90), Expect = 7e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 115617 GGTGAGGATCGAACTCACAACCTTGGCATTATAAGTACCACGCGCTGCCGATTGCGCTAC 115676 |||||||||||||||||| ||||||| ||||| || |||||||||||||| |||||||| Sbjct 30625 GGTGAGGATCGAACTCACGACCTTGGGATTATGAGACCCACGCGCTGCCGACTGCGCTAC 30566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448275504204360