Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotmaria_20passim_20[genbank_20GCA_5F000635995.1_202014-04-22] 2,801 sequences; 32,812,984 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq463 428 5e-115 seq2433 187 3e-42 seq1191 187 3e-42 >seq463 Length=3795 Score = 428 bits (474), Expect = 5e-115 Identities = 1180/1765 (67%), Gaps = 85/1765 (5%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || |||| ||||||| |||||||||||| || || ||| ||| | | |||| | Sbjct 2335 GTGCGCAGGTAGTACACGCCCGTCTTGAGGCCGCACTCCCACGTGTAGAAGAGCATCGAC 2276 Query 78250 GACAGCTTGGCCAGAC-TCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGAT 78308 | | || |||| || ||||| ||| || ||| | ||| | |||||| ||||||||||| Sbjct 2275 GTGATCT-GGCCCGAGGTCGGGCTCTGCAGGAACAGGTTCAACGACTGCGACTGGTCGAT 2217 Query 78309 GTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGT 78368 |||| ||||||||| ||||||||||| | | || ||||||||||| | ||| Sbjct 2216 GTACTGGCCGCGGTCGCGGGCCATGTCGATCAGCTTGCGCTGTGGAATCTCCCACACGGT 2157 Query 78369 CCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGT----ACGCTCCCACCGG 78424 ||||| | |||| || || || ||||| || | |||| | | || | Sbjct 2156 GCGGTAGAGCTCCTTGAGGTCGTCGGGGATG-CCGTCAATTGTCAGGATGGAGCCGTTGA 2098 Query 78425 CTCGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGA--TCCCG 78482 | | || || || || |||||| | | | || || || ||| Sbjct 2097 ATGAGATGATCTCGTTGCGCATCGTCTCGTTCCACAGGCCG--CGTCGGATGAGGTCCAT 2040 Query 78483 GACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTT 78542 || |||| | ||| | || ||||||||| || | ||||| | ||||||||| Sbjct 2039 CACGAGGTACTTGTTCACCACCGGGAACTCGCCACTCAAGACACGGCGTACGTAGATGTT 1980 Query 78543 GGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGG 78602 | ||| | |||||||| |||||| || || | |||||| | ||||| ||||| || Sbjct 1979 CGAGGTGAAGGGCTCGAAGCACTCGTTATTGCCGAGGATCTGCGACGTCGACGCGGTGGG 1920 Query 78603 CATGGGTGCGACCAGTAGAGAATTCCGAA----GACCATGCGTCTTGATCTCGACCTTTA 78658 ||| || || | || || || || || | |||| ||| || |||| ||| | Sbjct 1919 CATCGGCGCCAGCAAGAGGGAGTTGCGCATGCCGACC-TGCATCACCTTCTC---CTTCA 1864 Query 78659 GGCCGTCCCAAAATTCATTCGCCGC-------------GATCCCCCACATGTCCGGTTGA 78705 | | |||||| || ||||| | || ||||||||| || Sbjct 1863 GACTGTCCCAGTCC-CAGCGGCCGCTGTTCGGGCGGGGGTTCTTCCACATGTCGAACTGC 1805 Query 78706 AGGATACCCTCGGACGCCGGCGAC--CCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGG 78763 ||||| |||| || | ||| ||| |||||||| |||||||| | ||||||||||| | Sbjct 1804 AGGATCCCCT-GGCTGGCGG-GACTGCCCTTGAAGGTCTCGTACGGGCCCTCCTCCTTCG 1747 Query 78764 CGAGTTCGCAT-GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTG 78822 | | || ||| ||| | || || ||| ||| | | |||||| || | ||| Sbjct 1746 CCATCTC-CATCGACGCCTCCACCGCGGCGAAGTAGATGGTCTCGAAAATCTCAGCGTTC 1688 Query 78823 AGCTCGCGCGCCT-TGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAG 78881 | | |||||| || || | |||| | |||| |||| |||||| |||| ||||| Sbjct 1687 ACCCTCTGCGCCTCTGCACT-GACGAAGGGCAGGCGCAGCAAGATGAAGGCATCCGCCAG 1629 Query 78882 GCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGT 78941 |||||| ||||| | ||| || |||| |||||||||||| || |||| ||| Sbjct 1628 GCCCTGCACGCCCAAGCCGACAGGGCGGTTGCGCATGTTGCTGCGGCGCGCCGTCTCCAC 1569 Query 78942 CGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTC 79001 |||||| |||| || |||||||||||||||||||| || |||| | || || Sbjct 1568 CGGGTAGTAGTTGCGGTCGATGACGCGGTTCAGGTTGCGTGTGATCTGCTTCGTGACGCT 1509 Query 79002 GTACA--ATTTGGCGAAATCAAAAT---GATT-TCCT--TTGATGAAAGTCGGTAGGCAC 79053 ||| | | ||| || || | | | || |||| || | ||| || ||||| Sbjct 1508 GTAGAGCAGCTGGTGA--TCCATCTCGCGCTTCTCCTCGTTCACGAAG--CG--AGGCAG 1455 Query 79054 AGCGAT----GCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAAC-CTCGATGATTT 79108 ||||| || |||||||||||||| ||||| || |||| || ||| | || | Sbjct 1454 CGCGATCGAGGCGAGGTTGCACACGGCGGTCTCCTC-GGGCGAGGTGTACTCCACAATCT 1396 Query 79109 CTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTAC 79168 | ||||||| || || | ||||| ||||| | |||||||||||| ||| ||| | Sbjct 1395 CGGTGCACAGGTTCGAGCATTTGATCGTGCCAAGGTTCTTCTGGTTCGACTTGCTGTTGC 1336 Query 79169 AGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTG--ACTCTTGAGAACGCC 79226 | || ||||||||| ||| | ||| || ||||| | ||| |||| | || ||| Sbjct 1335 ACGCATCCTTGTAGAGGATGAAAGGCACGCCCGTCTCGATCTGTGACTCAAG-GATCGC- 1278 Query 79227 GTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCG 79286 | ||| | ||| | ||| ||| || | | || || | |||| | Sbjct 1277 GAACCACACCTCCTGCGCCTGGATCGTCTGCACGCCGCGGCCTTCCTTCTCGTAGCGCTC 1218 Query 79287 GTACAACTCGTTGAAAG-CCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGC 79345 ||||| |||| ||| |||| || ||| ||| ||| |||||||| | ||| Sbjct 1217 GTACAGG-CGTTCAAACTCCTCGCCGTAGCAGTCGCTCAGCCCCGGGCATGTGCTCGGAT 1159 Query 79346 ACATCAGGTGCCAGT---CCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCC 79402 |||||| ||| | ||||| |||| || |||| ||||| ||||| ||||||| Sbjct 1158 CCATCAGCGTCCACTTGCCCTCGCTCTTCACACGCTTC---ATGAACAGGTCTGGGATCC 1102 Query 79403 ACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCT 79462 ||| || |||||||| ||| ||| || || | ||| ||| | |||| Sbjct 1101 ACAACGCGTAAAAGAGGTCACGGGCGCGCTGGTCGTCCTTGCCGGTGTTGCGCTTCAGCA 1042 Query 79463 CGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGC 79522 | ||| | | ||||||||||||||||||||| || || | |||||| | ||||||| Sbjct 1041 GCAAGAAGCCGAAGATGTCGGCGTGCCACGGCTCAAGGTACACGGCGAAGGCGCCCTTGC 982 Query 79523 GCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCA 79582 |||| ||||||||||||| ||||| ||||| ||||||||||| || || ||||| |||| Sbjct 981 GCTTACCGCCGCCCTGGTCCACGTAGCGGGCAGTGTTGTTGAAGACGCGTAGCATCGGCA 922 Query 79583 CGATGCCGT-CGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTC 79641 | | || | || || ||||||||| ||| ||| | ||| | || ||||| Sbjct 921 CCAGCCCATTCGACGT-GCCGTTCGTGCCGGCGATGTAGCTGCCGGCGGAGCGGATGTT- 864 Query 79642 GAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGT 79700 | ||| ||| | || ||||| |||| | |||| |||| ||||||||||| ||||| Sbjct 863 GTGCACGTGCAGGCCAATGCCGCCGGCCGCCTTGCTGATGACTGCGCACTCCTTCAGCGT 804 Query 79701 CTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGA---CAT 79757 ||||| ||||| ||||| |||||||||| ||||||| |||||| ||| ||| Sbjct 803 ATCGTAAATGCCGTCGATGCTGTCGTCCTTCGAGGCGACCAAGAAGCA---CGAGCTCAT 747 Query 79758 CTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAA-CTTTT 79816 ||| || || ||| |||||||||||||||||||| || |||||||||||||| | || Sbjct 746 CTGCGGCTTCGGCGTGCCGGCGTTGAAGAGGGTCGGGGTGGCGTGCGTGAAGAAGCCCTT 687 Query 79817 GGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCG 79876 | ||||| ||||| ||||| |||| ||||||||| | |||||||||| | Sbjct 686 CG-ACATCAAGTCGTAGGTCTCGCGTACGCTTTTCAGGTCGTCGACATGGATGCCGAGGG 628 Query 79877 CGACGCGCATGAAGAGGTACTGGGG 79901 | ||||||| ||| || | ||| || Sbjct 627 CAACGCGCAGGAAAAGCTGCTGCGG 603 Score = 385 bits (426), Expect = 5e-102 Identities = 1140/1743 (65%), Gaps = 41/1743 (2%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| | |||||| |||| || || |||||||||||| ||||||||| | || Sbjct 603 CCGCAGCAGCTTTTCCTGCGCGTTGCCCTCGGCATCCATGTCGACGACCTGAAAAGCGTA 662 Query 19163 CGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTC 19222 |||||||| |||||| ||||| || |||||||||||||| || |||||||| ||| Sbjct 663 CGCGAGACCTACGACTTGATGTCGAAGGGCTTCTTCACGCACGCCACCCCGACCCTCTTC 722 Query 19223 AACGCCGGTACGAACAACCCGCAGATG---TCGAGCTGTTTCCTAGTGGCTATGAAGGAT 19279 |||||||| ||| || ||||||||| ||| || ||| | || || |||||| Sbjct 723 AACGCCGGCACGCCGAAGCCGCAGATGAGCTCG---TGCTTCTTGGTCGCCTCGAAGGAC 779 Query 19280 GACAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCC 19339 |||||||| || ||||| ||||| ||||| ||||||||||| |||| |||| | || Sbjct 780 GACAGCATCGACGGCATTTACGATACGCTGAAGGAGTGCGCAGTCATCAGCAAGGCGGCC 839 Query 19340 GGGGGTATCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGAC 19398 || || || || | ||| ||| | || ||||| || || | ||| || || Sbjct 840 GGCGGCATTGGCCTGCACGTGCAC-AACATCCGCTCCGCCGGCAGCTACATCGCCGGCAC 898 Query 19399 GAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTA 19458 |||||| | | || | || || ||||| ||||||||||||||||| ||| | || Sbjct 899 GAACGGCACGTCGAATGGGCTGGTGCCGATGCTACGCGTCTTCAACAACACTGCCCGCTA 958 Query 19459 CGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCA 19518 ||| ||||||| ||||| || ||||||||| | |||||| | ||||| ||||| ||||| Sbjct 959 CGTGGACCAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCCGTGTACCTTGAGCCGTGGCA 1018 Query 19519 CGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTG 19578 ||| ||| || | | ||| | ||| | ||| || | || || |||| Sbjct 1019 CGCCGACATCTTCGGCTTCTTGCTGCTGAAGCGCAACACCGGCAAGGACGACCAGCGCGC 1078 Query 19579 TCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGA 19638 || |||||||| || |||||||| || ||||| ||||| |||| || |||| Sbjct 1079 CCGTGACCTCTTTTACGCGTTGTGGATCCCAGACCTGTTCAT---GAAGCGTGTGAAGAG 1135 Query 19639 CGAAG---AATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGG 19695 ||| | | ||| |||||| ||| | |||||| || || |||| |||||| Sbjct 1136 CGAGGGCAAGTGGACGCTGATGGATCCGAGCACATGCCCGGGGCTGAGCGACTGCTACGG 1195 Query 19696 CGAGGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGT 19755 ||||| ||| | ||||| | |||| | ||||| | | || | | Sbjct 1196 CGAGGAGTTTGAACGCCTGTACGAGCGCTACGAGAAGGAAGGCCGCGGCGTGCAGACGAT 1255 Query 19756 CCGGGCCCGGGACGTCTGGGACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCGT 19814 || ||| | ||| || | || |||| |||| | ||| ||||||| ||| || | Sbjct 1256 CCAGGCGCAGGAGGTGT-GGTTCGCGATCCTTGAGTCACAGATCGAGACGGGCGTGCCTT 1314 Query 19815 ACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCA 19874 ||| ||||||||| || ||| |||||| || ||||||||| | ||| |||||| Sbjct 1315 TCATCCTCTACAAGGATGCGTGCAACAGCAAGTCGAACCAGAAGAACCTTGGCACGATCA 1374 Query 19875 AGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGT 19934 | | || |||||||| || || || ||||| || ||| || ||||| ||||||| Sbjct 1375 AATGCTCGAACCTGTGCACCGAGATTGTGGAGTACACCTCGCCCGAGGAGACCGCCGTGT 1434 Query 19935 GTAATCTGGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTG--- 19991 | || || || || | ||||| ||||| || | ||| | | Sbjct 1435 GCAACCTCGCCTCGATCGCGCTGCCTCGCTTCGTGAACGAGGAGAAGCGCGAGATGGATC 1494 Query 19992 -CCAAAT--TGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATC 20048 ||| | | ||| || || | |||| || || ||||| ||||||||||| | Sbjct 1495 ACCAGCTGCTCTACAGCGTCACGAAGCAGATCACACGCAACCTGAACCGCGTCATCGACC 1554 Query 20049 GGAACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGA 20108 | |||| |||||| ||| |||||||| || |||||| |||| || ||| Sbjct 1555 GCAACTACTACCCGGTGGAGACGGCGCGCCGCAGCAACATGCGCAACCGCCCTGTCGGCT 1614 Query 20109 TCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCA 20168 | ||||| ||||||||||| || | ||||| |||| |||| | |||| | | | Sbjct 1615 TGGGCGTGCAGGGCCTGGCGGATGCCTTCATCTTGCTGCGCCTGCCCTTCGTCAGTGCAG 1674 Query 20169 AGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAAT 20228 |||||| | | ||| | || |||||| || | ||| ||| || | || | Sbjct 1675 AGGCGCAGAGGGTGAACGCTGAGATTTTCGAGACCATCTACTTCGCCGCGGTGGAGGCGT 1734 Query 20229 CGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCG 20288 || || | || || ||||| |||||||||||||| |||||||| ||||| | Sbjct 1735 CGATGGAGATGGCGAAGGAGGAGGGCCCGTACGAGACCTTCAAGGGCAGTCCCGCCAGCC 1794 Query 20289 AGGGTATCCTCCAGCCGGACATGTGG----------GGCGTCACTGAG---AATGAGTTT 20335 |||| ||||| ||| ||||||||| | | || | | || | | Sbjct 1795 AGGGGATCCTGCAGTTCGACATGTGGAAGAACCCCCGCCCGAACAGCGGCCGCTGGGACT 1854 Query 20336 TGGAGCGCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCG 20395 ||| | || |||| || | | | ||| | |||||||| | | | ||| Sbjct 1855 GGGA-CAGTCTGAAGGAGAAGGTGATGCAGGTCGGCATGCGCAACTCCCTCTTGCTGGCG 1913 Query 20396 CCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTAC 20455 || ||||| ||||| ||||| | |||||| | || || |||||| |||||||| | | Sbjct 1914 CCGATGCCCACCGCGTCGACGTCGCAGATCCTCGGCAATAACGAGTGCTTCGAGCCCTTC 1973 Query 20456 ACGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCAC 20515 || | ||||||||| | || ||| || || |||||| |||| |||||| || Sbjct 1974 ACCTCGAACATCTACGTACGCCGTGTCTTGAGTGGCGAGTTCCCGGTGGTGAACAAGTAC 2033 Query 20516 CTGGTCCGCGACTTGCAGAAGA-TCGATATGTGGTCGCCCAAAATTAAGAATGAAATTGT 20574 || || ||| | || || || ||||| | || || || || | Sbjct 2034 CTCGTGATGGACCT-CATCCGACGCGGCCTGTGGAACGAGACGATGCGCAACGAGATCAT 2092 Query 20575 CCGAGCCGGCGGGAGCGTCCAGGC-ATTG--GATATCCCCCAGAACCTCAAGGACATTTA 20631 | | | ||| | ||| | | |||| | |||||| | |||||||||| | || Sbjct 2093 CTCATTCAACGGCTCCATCCTGACAATTGACGGCATCCCCGACGACCTCAAGGAGCTCTA 2152 Query 20632 CAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGC 20691 | | ||||| ||||| || |||||| | | ||||||||||| ||| |||||| Sbjct 2153 CCGCACCGTGTGGGAGATTCCACAGCGCAAGCTGATCGACATGGCCCGCGACCGCGGCCA 2212 Query 20692 CTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCT 20751 |||||||||||||| |||||| | || | ||| || ||| |||| | || || | Sbjct 2213 GTACATCGACCAGTCGCAGTCGTTGAACCTGTTCCTGCAGAGCCCGACCTCGGGCCAGAT 2272 Query 20752 GAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCG 20811 | || |||| | ||| ||| | || |||||||||||| ||||||| ||||| Sbjct 2273 CACGTCGATGCTCTTCTACACGTGGGAGTGCGGCCTCAAGACGGGCGTGTACTACCTGCG 2332 Query 20812 GAC 20814 || Sbjct 2333 CAC 2335 >seq2433 Length=14949 Score = 187 bits (206), Expect = 3e-42 Identities = 544/819 (66%), Gaps = 29/819 (4%) Strand=Plus/Minus Query 59617 TCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGCTCAATT 59676 ||||| | | |||||||| ||||| | | ||| ||||||| |||| ||||| || Sbjct 1082 TCTGGACGCTGGAGGAGATCGACCTGGGCAACGACATGAAGGACTGGGTGAAGCTGAACG 1023 Query 59677 ACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGAATTG 59736 ||| |||| ||| ||||||||| || || ||||||||||| | || || || || | Sbjct 1022 ACGGGGAGCGGCACTTCATCAAGCACGTGCTTGCCTTCTTCGCAGGCAGCGACGGCATCG 963 Query 59737 TGATGGAAAATATAGACATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGCCCGGTCGT 59796 |||| || || | | | ||| | || || || | | ||||| || ||| Sbjct 962 TGATCGAGAACCTTGCGCAGCGCTTCATGAGCGACGTGAAGGTGCCGGAGGCGCGCGCGT 903 Query 59797 TCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTCATGATCG 59856 | |||| || ||| | | | ||| |||||||| |||||||||||| | || | | Sbjct 902 TTTACGGGTTCCAGCTGATGATGGAGAACATCCACTCAGAGACGTACTCGGTGCTGCTGG 843 Query 59857 ATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTG-GTCTGTTCCGTGCCATAGAGACG-TC 59914 | | || ||| ||| || |||||| ||| | ||| | | || || ||||| || Sbjct 842 ACACGTACATCACGGACAGCGAGGAGAAG-CTGCGGCTGCTGCACGCGATCCAGACGATC 784 Query 59915 CCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGAGTCCTGGAGC-ATCAT 59973 || ||| | | | || ||||| ||||| ||| |||||| | ||||| | | Sbjct 783 CCGTGCATCCAGA-AGAAGGCAGAGTGGGCGGTGCGGTGGATTGGCAGCGGAGCGAGC-- 727 Query 59974 TTGCACAA-CGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 || || | || || || | || || ||||| || ||||||||||| || |||||| Sbjct 726 TTCCAGGAGCGGCTGATCGGCTTCGCGGCGGTGGAGGGCATCTTCTTCTCGGGGTCGTTC 667 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 || ||| | |||||||| || ||||| || || ||||| || |||| ||| ||||||| Sbjct 666 TGCGCTCTGTTCTGGCTGAAGAAGCGCGGGCTGATGCCTGGGCTGACGTTCAGCAACGAG 607 Query 60093 CTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGAC-GCT---CTATTCACA 60148 ||||| || || ||||||||||| || ||| ||||| ||| | ||| | | | || Sbjct 606 CTGATCTCGCGCGACGAGGGCCTGCACACGGACTTTGC-GTGCCTGCTGTACAACACGCA 548 Query 60149 CCTATTGGAAAAATGCCCTTCCAAGGATATTCACAAGATTGTTCAGTGGGC-TTGTGAA- 60206 | | | | || || | || | | |||| | || | | ||||| Sbjct 547 CATCAAGCACAAGCTGCCGCGCGAGCGCGTGCTGGAGATCAT--CGTAGACGCGGTGAAC 490 Query 60207 GTGGAGAGCGAGTTCATCACAGAAGCGCTTCC-ATGCAAACTCATAGGTATGGACGCTGG 60265 | ||| ||||||||||| || ||||| || ||| ||| || || ||| |||| | Sbjct 489 ATCGAGCGCGAGTTCATCTGCGACGCGCTGCCGGTGC-GACTGATCGGCATGAACGCGGA 431 Query 60266 AGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGCCT-----CATGGCCCAGTTTGGA 60320 ||| |||||||||| |||| || |||||||| || || || | |||| Sbjct 430 CCTGATGGCGCAGTACATCGAGTTCGTGGCGGACCGGCTGCTTGTATCGCTGGGGCTGGA 371 Query 60321 GAAGGACCAATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAA 60380 |||| || ||| ||||| | || ||||||| ||||||| |||||| || | Sbjct 370 GAAGCAC-----TACAACGTGACGCAGCCGTTCGACTTCATGGAGATGATCTCGCTGCAG 316 Query 60381 GGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTAT 60419 || ||||| |||||||| |||||| ||| || || ||| Sbjct 315 GGCAAGACGAACTTCTTCGAGAAGAAGGTGGGCGAGTAT 277 Score = 187 bits (206), Expect = 3e-42 Identities = 544/819 (66%), Gaps = 29/819 (4%) Strand=Plus/Minus Query 59617 TCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGCTCAATT 59676 ||||| | | |||||||| ||||| | | ||| ||||||| |||| ||||| || Sbjct 4211 TCTGGACGCTGGAGGAGATCGACCTGGGCAACGACATGAAGGACTGGGTGAAGCTGAACG 4152 Query 59677 ACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGAATTG 59736 ||| |||| ||| ||||||||| || || ||||||||||| | || || || || | Sbjct 4151 ACGGGGAGCGGCACTTCATCAAGCACGTGCTTGCCTTCTTCGCAGGCAGCGACGGCATCG 4092 Query 59737 TGATGGAAAATATAGACATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGCCCGGTCGT 59796 |||| || || | | | ||| | || || || | | ||||| || ||| Sbjct 4091 TGATCGAGAACCTTGCGCAGCGCTTCATGAGCGACGTGAAGGTGCCGGAGGCGCGCGCGT 4032 Query 59797 TCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTCATGATCG 59856 | |||| || ||| | | | ||| |||||||| |||||||||||| | || | | Sbjct 4031 TTTACGGGTTCCAGCTGATGATGGAGAACATCCACTCAGAGACGTACTCGGTGCTGCTGG 3972 Query 59857 ATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTG-GTCTGTTCCGTGCCATAGAGACG-TC 59914 | | || ||| ||| || |||||| ||| | ||| | | || || ||||| || Sbjct 3971 ACACGTACATCACGGACAGCGAGGAGAAG-CTGCGGCTGCTGCACGCGATCCAGACGATC 3913 Query 59915 CCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGAGTCCTGGAGC-ATCAT 59973 || ||| | | | || ||||| ||||| ||| |||||| | ||||| | | Sbjct 3912 CCGTGCATCCAGA-AGAAGGCAGAGTGGGCGGTGCGGTGGATTGGCAGCGGAGCGAGC-- 3856 Query 59974 TTGCACAA-CGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 || || | || || || | || || ||||| || ||||||||||| || |||||| Sbjct 3855 TTCCAGGAGCGGCTGATCGGCTTCGCGGCGGTGGAGGGCATCTTCTTCTCGGGGTCGTTC 3796 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 || ||| | |||||||| || ||||| || || ||||| || |||| ||| ||||||| Sbjct 3795 TGCGCTCTGTTCTGGCTGAAGAAGCGCGGGCTGATGCCTGGGCTGACGTTCAGCAACGAG 3736 Query 60093 CTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGAC-GCT---CTATTCACA 60148 ||||| || || ||||||||||| || ||| ||||| ||| | ||| | | | || Sbjct 3735 CTGATCTCGCGCGACGAGGGCCTGCACACGGACTTTGC-GTGCCTGCTGTACAACACGCA 3677 Query 60149 CCTATTGGAAAAATGCCCTTCCAAGGATATTCACAAGATTGTTCAGTGGGC-TTGTGAA- 60206 | | | | || || | || | | |||| | || | | ||||| Sbjct 3676 CATCAAGCACAAGCTGCCGCGCGAGCGCGTGCTGGAGATCAT--CGTAGACGCGGTGAAC 3619 Query 60207 GTGGAGAGCGAGTTCATCACAGAAGCGCTTCC-ATGCAAACTCATAGGTATGGACGCTGG 60265 | ||| ||||||||||| || ||||| || ||| ||| || || ||| |||| | Sbjct 3618 ATCGAGCGCGAGTTCATCTGCGACGCGCTGCCGGTGC-GACTGATCGGCATGAACGCGGA 3560 Query 60266 AGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGCCT-----CATGGCCCAGTTTGGA 60320 ||| |||||||||| |||| || |||||||| || || || | |||| Sbjct 3559 CCTGATGGCGCAGTACATCGAGTTCGTGGCGGACCGGCTGCTTGTATCGCTGGGGCTGGA 3500 Query 60321 GAAGGACCAATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAA 60380 |||| || ||| ||||| | || ||||||| ||||||| |||||| || | Sbjct 3499 GAAGCAC-----TACAACGTGACGCAGCCGTTCGACTTCATGGAGATGATCTCGCTGCAG 3445 Query 60381 GGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTAT 60419 || ||||| |||||||| |||||| ||| || || ||| Sbjct 3444 GGCAAGACGAACTTCTTCGAGAAGAAGGTGGGCGAGTAT 3406 >seq1191 Length=39656 Score = 187 bits (206), Expect = 3e-42 Identities = 544/819 (66%), Gaps = 29/819 (4%) Strand=Plus/Minus Query 59617 TCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGCTCAATT 59676 ||||| | | |||||||| ||||| | | ||| ||||||| |||| ||||| || Sbjct 29157 TCTGGACGCTGGAGGAGATCGACCTGGGCAACGACATGAAGGACTGGGTGAAGCTGAACG 29098 Query 59677 ACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGATGGAATTG 59736 ||| |||| ||| ||||||||| || || ||||||||||| | || || || || | Sbjct 29097 ACGGGGAGCGGCACTTCATCAAGCACGTGCTTGCCTTCTTCGCAGGCAGCGACGGCATCG 29038 Query 59737 TGATGGAAAATATAGACATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGCCCGGTCGT 59796 |||| || || | | | ||| | || || || | | ||||| || ||| Sbjct 29037 TGATCGAGAACCTTGCGCAGCGCTTCATGAGCGACGTGAAGGTGCCGGAGGCGCGCGCGT 28978 Query 59797 TCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTCATGATCG 59856 | |||| || ||| | | | ||| |||||||| |||||||||||| | || | | Sbjct 28977 TTTACGGGTTCCAGCTGATGATGGAGAACATCCACTCAGAGACGTACTCGGTGCTGCTGG 28918 Query 59857 ATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTG-GTCTGTTCCGTGCCATAGAGACG-TC 59914 | | || ||| ||| || |||||| ||| | ||| | | || || ||||| || Sbjct 28917 ACACGTACATCACGGACAGCGAGGAGAAG-CTGCGGCTGCTGCACGCGATCCAGACGATC 28859 Query 59915 CCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGAGTCCTGGAGC-ATCAT 59973 || ||| | | | || ||||| ||||| ||| |||||| | ||||| | | Sbjct 28858 CCGTGCATCCAGA-AGAAGGCAGAGTGGGCGGTGCGGTGGATTGGCAGCGGAGCGAGC-- 28802 Query 59974 TTGCACAA-CGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 || || | || || || | || || ||||| || ||||||||||| || |||||| Sbjct 28801 TTCCAGGAGCGGCTGATCGGCTTCGCGGCGGTGGAGGGCATCTTCTTCTCGGGGTCGTTC 28742 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAG 60092 || ||| | |||||||| || ||||| || || ||||| || |||| ||| ||||||| Sbjct 28741 TGCGCTCTGTTCTGGCTGAAGAAGCGCGGGCTGATGCCTGGGCTGACGTTCAGCAACGAG 28682 Query 60093 CTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGAC-GCT---CTATTCACA 60148 ||||| || || ||||||||||| || ||| ||||| ||| | ||| | | | || Sbjct 28681 CTGATCTCGCGCGACGAGGGCCTGCACACGGACTTTGC-GTGCCTGCTGTACAACACGCA 28623 Query 60149 CCTATTGGAAAAATGCCCTTCCAAGGATATTCACAAGATTGTTCAGTGGGC-TTGTGAA- 60206 | | | | || || | || | | |||| | || | | ||||| Sbjct 28622 CATCAAGCACAAGCTGCCGCGCGAGCGCGTGCTGGAGATCAT--CGTAGACGCGGTGAAC 28565 Query 60207 GTGGAGAGCGAGTTCATCACAGAAGCGCTTCC-ATGCAAACTCATAGGTATGGACGCTGG 60265 | ||| ||||||||||| || ||||| || ||| ||| || || ||| |||| | Sbjct 28564 ATCGAGCGCGAGTTCATCTGCGACGCGCTGCCGGTGC-GACTGATCGGCATGAACGCGGA 28506 Query 60266 AGAAATGACGCAGTACATTCAGTTTGTCGCGGACCGCCT-----CATGGCCCAGTTTGGA 60320 ||| |||||||||| |||| || |||||||| || || || | |||| Sbjct 28505 CCTGATGGCGCAGTACATCGAGTTCGTGGCGGACCGGCTGCTTGTATCGCTGGGGCTGGA 28446 Query 60321 GAAGGACCAATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAA 60380 |||| || ||| ||||| | || ||||||| ||||||| |||||| || | Sbjct 28445 GAAGCAC-----TACAACGTGACGCAGCCGTTCGACTTCATGGAGATGATCTCGCTGCAG 28391 Query 60381 GGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTAT 60419 || ||||| |||||||| |||||| ||| || || ||| Sbjct 28390 GGCAAGACGAACTTCTTCGAGAAGAAGGTGGGCGAGTAT 28352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548505594775440