Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotmaria_20passim_20[genbank_20GCA_5F002216525.1_202017-07-11] 5,924 sequences; 27,676,155 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3869 87.8 2e-12 seq3131 87.8 2e-12 seq3130 87.8 2e-12 >seq3869 Length=3640 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 65101 GTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGT 65160 |||||||| ||||||||||| ||||| ||||||||| | | ||| |||||||||| || Sbjct 3159 GTGGAGGGCATCTTCTTCTCGGGGTCGTTCTGCGCTCTGTTCTGGCTGAAGAAGCGCGGG 3218 Query 65161 CTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAG 65220 || ||||| || || ||| || || || || || || || ||||| || ||| | Sbjct 3219 CTGATGCCTGGGCTGACGTTCAGCAACGAGCTGATCTCGCGCGACGAGGGCCTGCACACG 3278 Query 65221 GAGTTTGC 65228 || ||||| Sbjct 3279 GACTTTGC 3286 >seq3131 Length=4254 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 65101 GTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGT 65160 |||||||| ||||||||||| ||||| ||||||||| | | ||| |||||||||| || Sbjct 472 GTGGAGGGCATCTTCTTCTCGGGGTCGTTCTGCGCTCTGTTCTGGCTGAAGAAGCGCGGG 531 Query 65161 CTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAG 65220 || ||||| || || ||| || || || || || || || ||||| || ||| | Sbjct 532 CTGATGCCTGGGCTGACGTTCAGCAACGAGCTGATCTCGCGCGACGAGGGCCTGCACACG 591 Query 65221 GAGTTTGC 65228 || ||||| Sbjct 592 GACTTTGC 599 >seq3130 Length=3696 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 65101 GTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGT 65160 |||||||| ||||||||||| ||||| ||||||||| | | ||| |||||||||| || Sbjct 482 GTGGAGGGCATCTTCTTCTCGGGGTCGTTCTGCGCTCTGTTCTGGCTGAAGAAGCGCGGG 423 Query 65161 CTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAG 65220 || ||||| || || ||| || || || || || || || ||||| || ||| | Sbjct 422 CTGATGCCTGGGCTGACGTTCAGCAACGAGCTGATCTCGCGCGACGAGGGCCTGCACACG 363 Query 65221 GAGTTTGC 65228 || ||||| Sbjct 362 GACTTTGC 355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596525424021120