Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotmaria_20passim_20[genbank_20GCA_5F002216525.1_202017-07-11] 5,924 sequences; 27,676,155 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2006 96.9 1e-14 >seq2006 Length=20365 Score = 96.9 bits (106), Expect = 1e-14 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAG 155648 || || || || || || || |||||||||| | | |||| || |||||||| | Sbjct 3673 ATCGAGGCGAGGTTGCACACGGCAGTCTCCTCGGGCGAGGTGTACTCCACAATCTCGGTG 3732 Query 155649 CACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCA 155708 |||||||| || | ||||| ||||| | ||||||||||| || || ||||| || ||| Sbjct 3733 CACAGGTTCGAGCATTTGATCGTGCCAAGGTTCTTCTGGTTCGACTTGCTGTTGCATGCA 3792 Query 155709 TCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 |||||||| || ||| | || || ||||| ||||| | || || ||| Sbjct 3793 TCCTTGTAGAGGATGAAAGGCACGCCCGTCTCGATCTGCGACTCAAGGATC 3843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471705887204388