Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotmaria_20passim_20[genbank_20GCA_5F002216525.1_202017-07-11] 5,924 sequences; 27,676,155 total letters Query= NC_022987.1 Length=43940 Score E Sequences producing significant alignments: (Bits) Value seq1099 84.2 6e-12 >seq1099 Length=5947 Score = 84.2 bits (92), Expect = 6e-12 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 10370 GCGAAGGTCTTCTCCTTCCAGCGTGCGTACGGCGCAGGCGTTGCGAAGATCGCAGCGACC 10429 |||||||| ||||| |||||||| ||||||||| ||||| ||| ||||| |||| Sbjct 766 GCGAAGGTGTTCTCGTTCCAGCGGCAGTACGGCGCCGGCGTGTCGACAATCGCCACGACA 707 Query 10430 ACGGGCATGACCGAGGAGGAAGTGGAGAAGCTGGTGCGCGCCGAGGCCGAGCGTTACCCG 10489 ||||| |||| ||| ||||||||||| |||| | ||| |||| | | ||| | Sbjct 706 ACGGGATTGACGGAGCAGGAAGTGGAGCGGCTGATCATCGCGGAGGAACACCACTACAAG 647 Query 10490 GAGCTGGGC 10498 |||||| || Sbjct 646 GAGCTGAGC 638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140476517132976