Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotmaria_20passim_20[genbank_20GCA_5F002216525.1_202017-07-11] 5,924 sequences; 27,676,155 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq3211 116 1e-21 >seq3211 Length=33623 Score = 116 bits (128), Expect = 1e-21 Identities = 216/314 (69%), Gaps = 10/314 (3%) Strand=Plus/Plus Query 37204 GGCGACCTGGGCATCATCCCTGGCTCGATGGGTGCGAAGTCA--TTCATCGTTCGCGGCA 37261 ||||| || | | |||| || || ||||||||||| | || | ||| || || |||| Sbjct 14019 GGCGAGCTTGCCGTCATTCCCGGGTCGATGGGTGC--ACGCAGCTACATTGTGCGTGGCA 14076 Query 37262 AGGGAAATTCCGAATCG---TTCTGCTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCC 37318 | || | ||| | | |||||| ||| ||||||||||| ||| |||| Sbjct 14077 AAGGCAG---CGAGGCCAGCTACTGCTCCTGCTCTCACGGTGCCGGACGACGCTACAGCC 14133 Query 37319 GGGCCGAAGCAAAACGCCGGTTCACAGTCGAGGATCATGAGGCGGCCACCAAAGGTATCG 37378 | | || ||| ||||| ||||| ||| || ||||| || ||||| || || | Sbjct 14134 GTGGTGAGGCACGCCGCCGCTTCACCCTCGCCGACCATGAAGCCGCCACGTCGGGGATTG 14193 Query 37379 AGTGCCGCAAAGATGCCGAAGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGATG 37438 |||| ||||| || | ||| | ||||||||||| ||||| ||||||||||| |||| Sbjct 14194 AGTGTCGCAAGGACAGCAGTGTGCTGGACGAGACGCCCGCGGCGTACAAGGACATTGATG 14253 Query 37439 CGGTCATGGCCGCGCAATCCGCCCTGGTGGACATCGTGCACACGCTGCGCCAAGTCGTTT 37498 | || || || || || | | ||||||| | ||| ||||| |||||| | | Sbjct 14254 CCGTGATTGCGGCCCAGCAGGACTTGGTGGAGGTGGTGACGGTGCTGCACCAAGTTTTGT 14313 Query 37499 GCGTGAAGGGTTGA 37512 |||||||||||||| Sbjct 14314 GCGTGAAGGGTTGA 14327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139273401775088