Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotmaria_20passim_20[genbank_20GCA_5F002216525.1_202017-07-11] 5,924 sequences; 27,676,155 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq2006 102 8e-17 >seq2006 Length=20365 Score = 102 bits (112), Expect = 8e-17 Identities = 222/332 (67%), Gaps = 3/332 (1%) Strand=Plus/Minus Query 7654 TTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCTCG 7713 || |||||||| | || ||| | || ||| ||||| ||| || || |||| Sbjct 4427 TTCACGCACGCCACCCCGACCCTCTTCAACGCCGGCACGCCGAAGCCGCAGATGAGCTCG 4368 Query 7714 TGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGAT 7773 || || ||| | || | || ||||||||||||||||||||| | |||||| || Sbjct 4367 TGCTTCTTGGTCGCCTCGAAGGACGACAGCATCGACGGCATTTACGATACGCTGAAGGAG 4308 Query 7774 TGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGCC 7833 ||||| || ||| | |||||| || || ||| |||| || || | ||| || Sbjct 4307 TGCGCAGTCATCAGCAAGGCGGCCGGCGGCATTGGCCTGCACGTGCACAACATCCGCTCC 4248 Query 7834 AACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGC 7893 ||| ||| ||||| ||| ||||| | | | || | | ||| ||| | ||| Sbjct 4247 GCCGGCAGCTACATCGCCGGCACGAACGGCACGTCGAATGGGCTGGTGCCGATGCTACGC 4188 Query 7894 GTGTTCAATAACGCGGTGCGACATGTAGACCAG---GGGGGAAAGCGCAAAGGCGCCGCT 7950 || ||||| ||| | | || | || |||||| || || |||||||| |||||| Sbjct 4187 GTCTTCAACAACACTGCCCGCTACGTGGACCAGGGCGGCGGTAAGCGCAAGGGCGCCTTC 4128 Query 7951 GCCATCTATTTGGAGCCGTGGCACGCGGACAT 7982 ||| | || | |||||||||||||| ||||| Sbjct 4127 GCCGTGTACCTTGAGCCGTGGCACGCCGACAT 4096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505360975248480