Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotmaria_20passim_20[genbank_20GCA_5F002216625.1_202017-07-11] 6,029 sequences; 27,738,775 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq5505 185 1e-41 >seq5505 Length=14715 Score = 185 bits (204), Expect = 1e-41 Identities = 409/607 (67%), Gaps = 20/607 (3%) Strand=Plus/Minus Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730 |||||| |||||| | |||||| || || ||||||||| ||||| || || ||| Sbjct 14123 CAGCTGCTCCTTCAGCGCCTCCACATGCGTGCTGTAGACGTGTGCGTCACCGAGTGTGTG 14064 Query 145731 GATGAAGTCCCCGGGCTCG-AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGT 145789 | | || || || ||| || || || | |||| || |||||||| || | Sbjct 14063 CACCAGCTCACCCGG-TCGCAGACCTGTCGCCTTCGCGATCAAAATCGTCAGCAGCGAAT 14005 Query 145790 AGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGC 145849 | ||| ||||| || ||||| || || |||||||| | || |||||||||||| || Sbjct 14004 ACGAGGCAATGTTAAACGGCACGCCGAGGCCCATGTCGCAGGAACGCTGGTACAGCATGC 13945 Query 145850 AGGAGAGCTCCC-CGCCCGC-----CACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCA 145903 | || ||||| || | |||||||||||||| || |||||||||||||||| Sbjct 13944 ACGACAGCTCTTTCGTTTGTGTGTTCACGTAGAACTGGCCAAGTAGGTGGCAGGGCGGCA 13885 Query 145904 GGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG- 145962 ||||||| | || | ||||||||| ||||||| || || ||| || ||| Sbjct 13884 GGGCCATCTGGTTCAACGCGCACGGGTTCCACGCGGTGAAGA---GCATCCGGCGGTCGT 13828 Query 145963 --GGGTTCCTCTTGA---TCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCC 146017 |||||| | ||| ||||| | ||| | ||| ||| |||||||| | || Sbjct 13827 TTGGGTTCGCCCTGAGCGTCTCCACAATCGACT---TGATCTGATCCACGCCTTCTCCGT 13771 Query 146018 GGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGA 146077 ||| | || | | || || ||||||||| |||||||| | ||||||||| ||||||| Sbjct 13770 CGTAGTTTGCGTCGCAGCCCCTGTACGCGGCGCCGAAGTGACGCCACTGGAAGCCGTAGA 13711 Query 146078 CGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGG 146137 |||| || |||||| || | | | || ||| | | ||||||| | || | Sbjct 13710 CGGGGCCGAGGTCCATTTCCTTGTTTTCCGTCAAACCGCGGCTGTCGAGGAACGCGCGTG 13651 Query 146138 ACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACC 146197 | ||||| ||||||| || | | | || | | | ||| | | || ||| || Sbjct 13650 AGGCGTTGCCGTCCCAAATATGAATGTCCTTGTCCGCCAGCAGCTGCGCGTTCGTCTCCC 13591 Query 146198 CCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCA 146257 | | | |||||| |||||||| || || || | ||||||||| | ||| || |||| Sbjct 13590 CACGCAAGAACCACAGCAGCTCCTCACACACGCCACGCCAGAAGACACGCTTCGTCGTCA 13531 Query 146258 GCAGGGG 146264 ||||||| Sbjct 13530 GCAGGGG 13524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590032330337160