Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotmaria_20passim_20[genbank_20GCA_5F002216625.1_202017-07-11] 6,029 sequences; 27,738,775 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq5663 91.5 2e-13 >seq5663 Length=14731 Score = 91.5 bits (100), Expect = 2e-13 Identities = 180/259 (69%), Gaps = 12/259 (5%) Strand=Plus/Plus Query 136687 TCCACGAGGTCCTTCTGGGCCTCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATT 136746 ||||| | ||||| ||||||| | || || || || ||||||||||| ||| || | Sbjct 418 TCCACCAAGTCCTGCTGGGCCGCAATCACGGCATCAATGTCCTTGTACGCCGCGGGCGTC 477 Query 136747 TCGTCGATCACGCCAGCGTCCTTGCGGCACTCCACGCCCTCGGTGGC--CTTGATCTGGT 136804 ||||| | ||| | ||||||||| ||||| | ||| ||||| ||| | |||| Sbjct 478 TCGTCCAGCACACTGCTGTCCTTGCGACACTCAATCCCCGACGTGGCGGCTTCA--TGGT 535 Query 136805 CCTCCAGGGTGAAG-GTCGCCTTGGCCTGGGTCCGCGAC---ATCGTCCGGCCCGCGCCG 136860 | | ||||||||| | || | | |||| || || | | ||| || || || ||| Sbjct 536 CGGCGAGGGTGAAGCGGCGGCGT-GCCT--CACCACGGCTGTAGCGT-CGTCCGGCACCG 591 Query 136861 TGCGAGCACGAGCAGAACGAGTCCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCC 136920 || ||||| |||||| | | || | |||| ||||| ||||| |||||| || Sbjct 592 TGAGAGCAGGAGCAGTAGCTGGCCTCGCTGCCTTTGCCACGCACAATGTAGCTGCGTGCA 651 Query 136921 CCCATCGAGCCGGGGATGA 136939 |||||||| ||||| |||| Sbjct 652 CCCATCGACCCGGGAATGA 670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690091989022800