Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Perkinsela_20sp._20CCAP_201560_2F4_20[genbank_20GCA_5F001235845.1_20 2015-08-05] 693 sequences; 9,477,801 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq171 244 9e-60 seq531 239 4e-58 seq243 205 8e-48 seq254 152 5e-32 seq512 91.5 1e-13 >seq171 Length=86538 Score = 244 bits (270), Expect = 9e-60 Identities = 622/933 (67%), Gaps = 19/933 (2%) Strand=Plus/Plus Query 57505 CCGATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATC 57564 |||| || ||| | | ||||| || || |||| ||| ||||||| || || |||| Sbjct 4130 CCGAAGAGCCAATGCTTCAAGAAAACCCGAACAGATATGTTCTGTTTCCAATCGAGTATC 4189 Query 57565 CAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAG 57624 | || |||||||| | |||||| | ||||| || ||||||||||| || |||||||||| Sbjct 4190 CCGATATTTGGAAGAAATACAAAGAAGCAGAGGCTTCGTTTTGGACAGTTGAAGAAGTAG 4249 Query 57625 ACCTGTCTAAGGATCTGAGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTA 57681 |||| || | ||| | | || ||||| | || || || ||| | | || | Sbjct 4250 ACCTTTCCCAAGATGTTAAAGAATGGGAAGACAAGCTTAACGACGACGAGCGTCACTTCA 4309 Query 57682 TTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCG 57741 | || ||||| |||| |||||||| ||||| ||||| || || |||||| | | | Sbjct 4310 TCAAGCACGTTCTGGCATTTTTCGCAGCATCTGATGGAATAGTCCTTGAGAATCTTGCGG 4369 Query 57742 AAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGG 57801 | | || | || | || | | || | | |||||||| || || ||| | | Sbjct 4370 CACGCTTCATGAACGACATTCAGATCGCTGAAGTTCGTTGCTTTTATGGTTTCCAAATCG 4429 Query 57802 CCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACA 57861 | |||||||| | || || || |||||||| | || ||||| ||||| | ||| || Sbjct 4430 CGATTGAAAATATTCACTCGGAGATGTATTCCATCCTGATCGACACGTATATCAAGAACC 4489 Query 57862 ACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAAG 57920 | | || || || || |||||||| || || || || || | | || || |||| Sbjct 4490 AAGCAGATAAGGCAAGGCTCTTCAACGCTATGGAGACTATTCCGTGTGTTCAGCA-GAAG 4548 Query 57921 GCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATC 57980 || ||||| |||| |||||||| || || | | |||||||||| || || || Sbjct 4549 GCTCAGTGGGCAATTAAATGGATTAATTCAGCA---GACTCGTTCGCCGAAAGACTTGTC 4605 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 | |||||| || || || || || ||||| || || || ||||| || ||| | Sbjct 4606 GGGTTCGCAGCTGTGGAGGGAATCTTCTTCAGTGGAAGTTTCTGTGCAATTTTCTGGCTC 4665 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || || | ||||| || | || || || |||||| | || || || || ||| Sbjct 4666 AAGAAGCGAGGATTAATGCCAGGTTTAACCTTCAGTAACGAGCTCATTTCCCGTGATGAG 4725 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACT-CTCACA-TTGTC-AATAAACCGACG 58157 || | || ||| || || || || | ||| |||||| ||| || || | | | Sbjct 4726 GGGTTGCACTGTGACTTCGCTTGTCTCTTATACAGCTCACACTTGAAGAACAAGCTGTCA 4785 Query 58158 CGGGATCGCAT-CTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216 | ||| || | | | | || ||| |||||| ||| ||||| | |||||||| || Sbjct 4786 CAGGACCGAGTACATTCA-ATCATCCACGAGGCCGTCAAAATCGAGCAAGAGTTTGTGAC 4844 Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276 ||| || || || ||| | |||| |||||| ||| | ||| |||||||||| Sbjct 4845 CGATGCGCTTCCCGTGCGACTCATCGGGATGAACGCAGATCTTATGAACCAGTACATTGA 4904 Query 58277 GTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAG-AGCGTCATTACAACACGAA 58333 ||| ||||| | || | || ||| | | ||| |||| ||||| || Sbjct 4905 GTTCTGCGCCGATCGTCTGATCACCGCACTCGGGTATGAGAAGCG---GTACAAAGTCAA 4961 Query 58334 AAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaa 58393 ||| |||||||| |||||| | |||| || ||| |||| ||||||||||| || || || Sbjct 4962 AAACCCGTTTGACTTTATGGAAATGATTTCTCTCCAGGGAAAGACAAACTTCTTTGAGAA 5021 Query 58394 aaaaGTTAGCGAATATCAAAAATACGGCGTGAT 58426 || | || ||||| || ||||||||| Sbjct 5022 GCGCGTCGGTGACTATCAGAAGGCCGGCGTGAT 5054 >seq531 Length=50098 Score = 239 bits (264), Expect = 4e-58 Identities = 621/933 (67%), Gaps = 19/933 (2%) Strand=Plus/Plus Query 57505 CCGATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATC 57564 |||| || ||| | | ||||| || || |||| ||| ||||||| || || |||| Sbjct 47116 CCGAAGAGCCAATGCTTCAAGAAAACCCGAACAGATATGTTCTGTTTCCAATCGAGTATC 47175 Query 57565 CAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAG 57624 | || |||||||| | |||||| | ||||| || ||||||||||| || |||||||||| Sbjct 47176 CCGATATTTGGAAGAAATACAAAGAAGCAGAGGCTTCGTTTTGGACAGTTGAAGAAGTAG 47235 Query 57625 ACCTGTCTAAGGATCTGAGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTA 57681 |||| || | ||| | | || ||||| | || || || ||| | | || | Sbjct 47236 ACCTTTCCCAAGATGTTAAAGAATGGGAAGACAAGCTTAACGACGACGAGCGTCACTTCA 47295 Query 57682 TTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCG 57741 | || ||||| |||| |||||||| ||||| ||||| || || |||||| | | | Sbjct 47296 TCAAGCACGTTCTGGCATTTTTCGCAGCATCTGATGGAATAGTCCTTGAGAATCTTGCGG 47355 Query 57742 AAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGG 57801 | | || | || | || | | || | | |||||||| || || ||| | | Sbjct 47356 CACGCTTCATGAACGACATTCAGATCGCTGAAGTTCGTTGCTTTTATGGTTTCCAAATCG 47415 Query 57802 CCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACA 57861 | |||||||| | || || || |||||||| | || ||||| ||||| | ||| || Sbjct 47416 CGATTGAAAATATTCACTCGGAGATGTATTCCATCCTGATCGACACGTATATCAAGAACC 47475 Query 57862 ACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAAG 57920 | | || || || || |||||||| || || || || || | | || || |||| Sbjct 47476 AAGCAGATAAGGCAAGGCTCTTCAACGCTATGGAGACTATTCCGTGTGTTCAGCA-GAAG 47534 Query 57921 GCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATC 57980 || | ||| |||| |||||||| || || | | |||||||||| || || || Sbjct 47535 GCTCAATGGGCAATTAAATGGATTAATTCAGCA---GACTCGTTCGCCGAAAGACTTGTC 47591 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 | |||||| || || || || || ||||| || || || ||||| || ||| | Sbjct 47592 GGGTTCGCAGCTGTGGAGGGAATCTTCTTCAGTGGAAGTTTCTGTGCAATTTTCTGGCTC 47651 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || || | ||||| || | || || || |||||| | || || || || ||| Sbjct 47652 AAGAAGCGAGGATTAATGCCAGGTTTAACCTTCAGTAACGAGCTCATTTCCCGTGATGAG 47711 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACT-CTCACA-TTGTC-AATAAACCGACG 58157 || | || ||| || || || || | ||| |||||| ||| || || | | | Sbjct 47712 GGGTTGCACTGTGACTTCGCTTGTCTCTTATACAGCTCACACTTGAAGAACAAGCTGTCA 47771 Query 58158 CGGGATCGCAT-CTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216 | ||| || | | | | || ||| |||||| ||| ||||| | |||||||| || Sbjct 47772 CAGGACCGAGTACATTCA-ATCATCCACGAGGCCGTCAAAATCGAGCAAGAGTTTGTGAC 47830 Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276 ||| || || || ||| | |||| |||||| ||| | ||| |||||||||| Sbjct 47831 CGATGCGCTTCCCGTGCGACTCATCGGGATGAACGCAGATCTTATGAACCAGTACATTGA 47890 Query 58277 GTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAG-AGCGTCATTACAACACGAA 58333 ||| ||||| | || | || ||| | | ||| |||| ||||| || Sbjct 47891 GTTCTGCGCCGATCGTCTGATCACCGCACTCGGGTATGAGAAGCG---GTACAAAGTCAA 47947 Query 58334 AAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaa 58393 ||| |||||||| |||||| | |||| || ||| |||| ||||||||||| || || || Sbjct 47948 AAACCCGTTTGACTTTATGGAAATGATTTCTCTCCAGGGAAAGACAAACTTCTTTGAGAA 48007 Query 58394 aaaaGTTAGCGAATATCAAAAATACGGCGTGAT 58426 || | || ||||| || ||||||||| Sbjct 48008 GCGCGTCGGTGACTATCAGAAGGCCGGCGTGAT 48040 >seq243 Length=69200 Score = 205 bits (226), Expect = 8e-48 Identities = 936/1475 (63%), Gaps = 43/1475 (3%) Strand=Plus/Minus Query 22432 CAAATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTG 22491 || ||| ||||| || | |||||| | | || || || || | || ||||| | Sbjct 23019 CATATCCTTGACAAGGTACTTGTTCACAATGGGGAATTCTCCAGAAAGCACACGGCGGAG 22960 Query 22492 GTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGA 22551 ||||||||| || || || || || | |||| || ||||| || || || | ||||| Sbjct 22959 GTAAATGTTCGAGGTAAAGGGCTCAATGCATTCGTTATTTCCGAGAATTTGTGATGTCGA 22900 Query 22552 AGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACT 22611 || || ||||| ||||| | || || ||||| | || | || ||| || | Sbjct 22899 CGCAGTAGGCATGGGCGCGAGGAGGAGGGAGTTGCGTGCTCCATTCTCCAGAATATTCTT 22840 Query 22612 CTTGAG--CATCGACCAGTCCCACAGATCGGAC---GGCGTCACATTGTCCCACATATCG 22666 ||| || |||| ||| ||||| | | | ||| | || || ||| | || Sbjct 22839 CTTCAGTGCATC--CCAATCCCATCGCCCACTCTTCGGCTTGACCTT---CCAGAGGTCA 22785 Query 22667 TATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATC 22726 | ||||| | || |||||| ||| ||| | || |||| || ||||| | | Sbjct 22784 AACTGCAATTCTCCACGACTCAACGGACTGTTGGCATAGCTTTCATATGGACCGGACTGC 22725 Query 22727 GCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTG 22786 ||||| ||||||||| |||||| ||||| | ||||| || || ||||| | | | Sbjct 22724 TTCGCAAGCTCGCAGCTCTTCTCCAAAGCGCCAAAGTATATTGTTTCAAAGATGTCTTCG 22665 Query 22787 TTCAATTCGGCGGCGGCGACGCTTTCGT--ACGGCATACGCATCATCACGAACGCGTCCG 22844 |||||| || ||| | | | |||| |||| || || | || ||| | ||| | Sbjct 22664 TTCAATC--GCTGCGCAGTCTCACTCGTGAACGGAATTTTCAGAAGCAAGAATGTGTCTG 22607 Query 22845 CCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGG 22904 | | ||| |||||||| || ||||| ||||| | |||| ||| || |||||||||| Sbjct 22606 CGAGACCTTGAACGCCGATTCCGATGGGTCGATGCTTCATATTGGAATACTTTGCCTCGG 22547 Query 22905 GCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTA 22964 | | ||||| | |||| || || |||||||| || || | | || | Sbjct 22546 GAACTGGATAATAGTTCGCGTCAATGACTCTGTTCAGACCAAAAGTGACGACCTGCGAAA 22487 Query 22965 TNNNNNNNNNNNNNTCAAAGTCGTAAACG------CCCGATTGTACA---------ACAA 23009 ||||||||| ||| | || || | | |||| Sbjct 22486 CATATCTCAACATGTCAAAGTCGAAAAAGAGGCTTCCATCTTCTTCGTTTTTCTTGACAA 22427 Query 23010 ACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACT 23069 || | | || ||||| || |||||||| ||||| |||||||| ||| || || | Sbjct 22426 ACATCGGAAGGGAAATCGACGCGAGATTGCAGACGGCAACCTCGTCAGGGGATGTATATT 22367 Query 23070 CTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTT 23129 | || ||||| || || || ||||||||||| |||||||||||||| |||| ||| | Sbjct 22366 CGACGATTTCAGTGCACAGGTTGCTACACTTGATCGTGCCCAAATTCTTCTGATTGGACT 22307 Query 23130 TTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGA 23189 || ||| || | ||||| || ||||||||||| || || || || | ||| ||||||| Sbjct 22306 TTTCATTACATGCGTCCTTATAAAGCATGTACGGGGTACCGGTTTCTATCTGGGACTCGA 22247 Query 23190 TGATCGCTCGCCACATAG-TC-TGAG-CGTGAACACGTCGCACGTACCTGCCTTCTTCCT 23246 |||| | | || || || || | |||| || | | ||||||||| | Sbjct 22246 TGAT--TTGGAACCAGAGCTCTTGCGCCGTG-ACTGTTTTCGTTCCCCTGCCTTCACGTT 22190 Query 23247 CGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATT 23306 | || | | ||| || ||||| || | || || ||||| || ||||| || | Sbjct 22189 CATATTGCTCGTATAATTTTTCAAACTCTTCTCCATAGCAGTCAGCGAGGCCTGGAGCAA 22130 Query 23307 GCATCGGACACATGAGACTCCACATTGAGTCA-TTTTCAACGCGTCTCATAAAAAGATCC 23365 | || | || |||| || | | |||| || || ||||||| | ||| Sbjct 22129 TATTAGGGTCGAAAAGTGTCCA-GTTCCCTGATTTTTGCACACGCTTCATAAACAAATCT 22071 Query 23366 GGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTT 23425 || ||||| || | || || || || || ||||||| || ||||| |||||||| Sbjct 22070 GGAATCCAGAGTCCATAAAAGAGATCACGAGCGCGCATTTCTTCTTTCCCGGTGTTTCGC 22011 Query 23426 TTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCG 23485 || | | ||| || || | || |||||||| || || | || | ||||| || Sbjct 22010 TTGAGCGTGAGAAATTCGAAAATATCTGCATGCCAGGGTTCTACATAGATTGCAAATGCA 21951 Query 23486 CCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGC 23545 || ||| || || || || || || || || ||||| | ||| | || | ||| Sbjct 21950 CCTTTTCTTTTGCCACCACCTTGGTCAACATATCGTGCCGTATCATTGAAAACACGAAGC 21891 Query 23546 ATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCA---CACTCGAACCTTTTGCT 23602 || || || || || ||| || || || || | ||| || ||| Sbjct 21890 ATTGGAACAAGCCCATTGCTCGTTCCATTGGTTCCAGCGATGTAACT---TCCACATGCG 21834 Query 23603 CGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGT 23662 || | || ||| ||||| | || || |||||| ||||||| || | ||| ||| | Sbjct 21833 CGGATGTCGTGCACGTGTAGGCCGATTCCTCCGGCCGATTTGCTGATAAGCGCACATGTT 21774 Query 23663 TTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAA 23722 ||| |||||| | || || || ||| || |||||||| | |||||||| | Sbjct 21773 CGCAGTGTGTCGAATATTCCTGGTATAGAGTCTTCCTTGGTCGCAATTAAGAAACAGCTA 21714 Query 23723 GACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTAT 23782 ||| || | ||| || ||| | || ||||| || || | ||||||||||| || Sbjct 21713 CTCATCTGAGGTTTCGGAGTACCTGCATTAAACAGCGTTGGTGTCGCGTGCGTAAACCAT 21654 Query 23783 CCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCG 23842 || | || | | ||||| | || | | || |||| || | |||| || ||| Sbjct 21653 CCTTCGGAGAGCAATTTGTAGCTTTCTTTCACTGCTTCAAAATCAGGTGCGTGGATTCCG 21594 Query 23843 ATGGCGACGCGCATCATCATGTATTGAGGTCTCTC 23877 || || || |||| | |||||||||||||||||| Sbjct 21593 ATCGCAACCCGCAAAAGCATGTATTGAGGTCTCTC 21559 >seq254 Length=68440 Score = 152 bits (168), Expect = 5e-32 Identities = 465/706 (66%), Gaps = 16/706 (2%) Strand=Plus/Plus Query 23021 GCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCG 23080 |||| ||||| || ||||| ||||| || || || | |||||||| | || || Sbjct 31848 GCGAGGGAGGCGAGGTTGCACACGGCGACTTCATCCGGTGCGGTGTACTCGATGATCTCC 31907 Query 23081 GTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCAC 23140 || || ||||| || || || || || | || |||||| || || ||||| Sbjct 31908 GTGCACAGATTTGAGCATTTGATGGTTCCAAGGTTTTGCTGGTTCGACTTGCGGTTGCAT 31967 Query 23141 GAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGC 23200 | ||| ||||| |||| |||||||| |||||||||| ||||| || ||||| || | Sbjct 31968 GCATCTTTGTATAGCAAATACGGCGTTCCCGTCTCGATCTGCGCTTCAATGATGGCGAAC 32027 Query 23201 CACATAGTCTGAGCGTGAACACGTCGCACGTACC---TGCCTTCTTCCTCGTACTTTTGG 23257 || | | || |||| | |||| ||||| | || | |||||||| | Sbjct 32028 CAGAGATCTTGTGCGTCCAT-CGTCTT--GTACCCTTTATTATCCTTCTCGTACTGCTCA 32084 Query 23258 TACA-ACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACA 23316 || | || | || ||||| || || | || ||||| || || || | | | ||| Sbjct 32085 TAGAGACTC-TCGAATTCAGCGCCCCAGCAATCGGCGAGCCCAGGGGCTGTTTTGGGATC 32143 Query 23317 CATGAGACTCCACATTGAGTCATTTTCA--ACGCGTCTCATAAAAAGATCCGGTATCCAT 23374 | || |||| ||| | | || | || || |||| || || || || ||||| Sbjct 32144 GAAAAGTGTCCAT-TTG-GCCTTTCGCTGCACTCGCTTCATGAAGAGGTCGGGGATCCAG 32201 Query 23375 AGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCC 23434 ||| ||||||| || || | || || | |||||| |||||||||||||| |||| | | Sbjct 32202 AGACCGTAGAAGAGGTCTCTCGCCCGAATCTCCTCCTTGCCGGTGTTCTTCTTCAGGTTC 32261 Query 23435 AAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTC 23494 ||||| |||| | || || ||||||||||| ||||| | |||||| ||| | | Sbjct 32262 AAAAAATCCATAATATCAGCGTGCCACGGCTCAAGGTAGATGGCAAAGCTGCCTTTGCGC 32321 Query 23495 TTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACG 23554 || || || || |||||||| ||||| |||| |||| | |||| ||||| || || Sbjct 32322 TTTCCACCTCCTTGGTCGACGTAGCGGGCAGTGTCGTTGAAGACTCGCAGCATGGGGACT 32381 Query 23555 AGACCGTTGGACGCGCCGCCTACG-CCCGCCACACTCGAACCTTTTGC-TCGAACGTTGT 23612 | || || || || | | | ||||| | | | | || ||||| ||||| Sbjct 32382 ATTCCATT--ACTGACCCCATTTGTCCCGCGAATGTAGCTTCCAGAGCTTCGAATGTTGT 32439 Query 23613 GAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGT 23672 |||| || || || ||||| || | ||||| || | ||| ||| || || || | Sbjct 32440 GAACATGCAAGCCAATGCCACCACTGTTCTTCGAGATGAGCGCACATGTCTTGAGCGTAT 32499 Query 23673 CGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACA 23718 |||| || || ||||| || |||||| ||| | || ||| || Sbjct 32500 CGTAAATACCTTCGATCGAATCATCTTTGAGCGCCAGCAGGAAGCA 32545 >seq512 Length=1106 Score = 91.5 bits (100), Expect = 1e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 57505 CCGATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATC 57564 |||| || ||| | | ||||| || || |||| ||| ||||||| || || |||| Sbjct 943 CCGAAGAGCCAATGCTTCAAGAAAACCCGAACAGATATGTTCTGTTTCCAATCGAGTATC 1002 Query 57565 CAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAG 57624 | || |||||||| | |||||| | ||||| || || |||||||| || |||||||||| Sbjct 1003 CCGATATTTGGAAGAAATACAAAGAAGCAGAGGCTTCATTTTGGACAGTTGAAGAAGTAG 1062 Query 57625 ACCTGTCTAAGGATCTGAGCGATTGGGA 57652 |||| || | ||| | | || ||||| Sbjct 1063 ACCTTTCCCAAGATGTTAAAGAATGGGA 1090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445762538548560