Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Perkinsela_20sp._20CCAP_201560_2F4_20[genbank_20GCA_5F001235845.1_20
2015-08-05] 693 sequences; 9,477,801 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq2 100 1e-15
>seq2
Length=132159
Score = 100 bits (110), Expect = 1e-15
Identities = 157/225 (70%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| ||||| |||||||| || ||||| || || || || ||| ||
Sbjct 77985 ATGCAGATCTTCGTCAAAACTCTGACTGGCAAGACTATCACACTCGAGGTGGAAGCAAAC 78044
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||||||| || || |||| ||||||| ||||||||||| || || || ||
Sbjct 78045 GATACCATTGAAAACATCAAGGCAAAAGTTCAAGACAAGGAAGGAATCCCACCAGACCAG 78104
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| || | |||||| | || || || || || ||||| | || || | || || ||
Sbjct 78105 CAGCGACTCATTTTCGCCGGAAAGCAGCTCGAGGATGGGCGCACGCTGTCAGACTACAAC 78164
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274
||| | || || || |||||| | || | | ||| |||||
Sbjct 78165 ATTCAGAAAGAAAGCACCCTTCACCTCGTTCTTCGGCTGCGAGGA 78209
Score = 98.7 bits (108), Expect = 4e-15
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| ||||| |||||||||| || || || ||||| || ||| ||
Sbjct 77757 ATGCAGATCTTCGTCAAAACTTTGACTGGTAAGACCATCACCCTTGAGGTGGAAGCAAAC 77816
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||||||| || || |||| ||||||| ||||||||||| || || || ||
Sbjct 77817 GATACCATTGAAAACATCAAGGCAAAAGTTCAAGACAAGGAAGGAATCCCACCAGACCAG 77876
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| || | |||||| | || || || || || ||||| | || || | || || ||
Sbjct 77877 CAGCGACTCATTTTCGCCGGAAAGCAGCTCGAGGATGGGCGCACGCTGTCAGACTACAAC 77936
Query 391230 ATTGATAAGGATGCAACACTTCAC 391253
||| | || || || ||||||
Sbjct 77937 ATTCAGAAAGAAAGCACCCTTCAC 77960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975700857472844
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |