Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Perkinsela_20sp._20CCAP_201560_2F4_20[genbank_20GCA_5F001235845.1_20 2015-08-05] 693 sequences; 9,477,801 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq254 107 4e-18 >seq254 Length=68440 Score = 107 bits (118), Expect = 4e-18 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 222037 CTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTC 222096 || |||||||||||| |||||||| || | | ||||| ||||| | ||| |||||| Sbjct 32177 CTTCATGAAGAGGTCGGGGATCCAGAGACCGTAGAAGAGGTCTCTCGCCCGAATCTCCTC 32236 Query 222097 CACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAG 222156 | |||| |||| ||| |||| | |||||| || | ||| ||||||||||||||||| || Sbjct 32237 CTTGCCGGTGTTCTTCTTCAGGTTCAAAAAATCCATAATATCAGCGTGCCACGGCTCAAG 32296 Query 222157 ATAGACGGC 222165 |||| ||| Sbjct 32297 GTAGATGGC 32305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928836753881920