Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Perkinsela_20sp._20CCAP_201560_2F4_20[genbank_20GCA_5F001235845.1_20 2015-08-05] 693 sequences; 9,477,801 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq243 91.5 4e-13 >seq243 Length=69200 Score = 91.5 bits (100), Expect = 4e-13 Identities = 131/182 (72%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 155568 TTTACAAACATACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTC-GTC 155626 || |||||||| ||| ||| ||||| ||||| || || ||| ||| ||| | Sbjct 22433 TTGACAAACATCGGAAGGGAAATCGACGCGAGATTGCAGACGGCAACCTC---GTCAGGG 22377 Query 155627 GCTGTAT--TCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTC 155684 | ||||| || || || ||| ||||||||| || |||||| ||||| ||||||||| Sbjct 22376 GATGTATATTCGACGATTTCAGTGCACAGGTTGCTACACTTGATCGTGCCCAAATTCTTC 22317 Query 155685 TGGTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATC 155744 || || || || ||||| || ||||| || || ||||| ||||| || || || ||| Sbjct 22316 TGATTGGACTTTTCATTACATGCGTCCTTATAAAGCATGTACGGGGTACCGGTTTCTATC 22257 Query 155745 TG 155746 || Sbjct 22256 TG 22255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471804531639541