Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Perkinsela_20sp._20CCAP_201560_2F4_20[genbank_20GCA_5F001235845.1_20 2015-08-05] 693 sequences; 9,477,801 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq117 87.8 1e-11 >seq117 Length=108883 Score = 87.8 bits (96), Expect = 1e-11 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 637140 TCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCAACTATTATTGGTGAATC 637199 ||| ||||| || || ||||||||| |||| ||||| | ||||| || ||||| || | Sbjct 47448 TCCCAATATCGCGAAGGAAATGCATGTTGGCCATTTGCGGTCAACGATCATTGGAGATGC 47507 Query 637200 TATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATCGTATTAATCATGTGGGTGA 637259 | || ||| | | || | ||||| ||||| || |||||| || ||| | ||||| Sbjct 47508 ACTGTGCAGGATGTACGAGTTCTGTGGCCACGAAGTGCTTCGTATCAACCATATCGGTGA 47567 Query 637260 TTGGGGAACTCAATTCGGTATGTTAATTGCTTA 637292 |||||| || ||||| || ||| | || || || Sbjct 47568 TTGGGGCACACAATTTGGCATGCTCATAGCCTA 47600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740596376628618