Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Perkinsela_20sp._20CCAP_201560_2F4_20[genbank_20GCA_5F001235845.1_20 2015-08-05] 693 sequences; 9,477,801 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 5e-11 >seq2 Length=132159 Score = 84.2 bits (92), Expect = 5e-11 Identities = 145/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| || || || || || ||||| | || |||||| || Sbjct 77988 CAGATCTTCGTCAAAACTCTGACTGGCAAGACTATCACACTCGAGGTGGAAGCAAACGAT 78047 Query 206233 ACAGTCGAAT-CAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || || ||||||| ||||||| || |||||||| || ||| || Sbjct 78048 ACCATTGAAAACATCAAGGCAAAAG-TTCAAGACAAGGAAGGAATCCCACCAGACCAGCA 78106 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||| || ||||||||||||||| | || ||||| | || || | || |||||| | Sbjct 78107 GCGACTCATTTTCGCCGGAAAGCAGCTCGAGGATGGGCGCACGCTGTCAGACTACAACAT 78166 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTT 206379 |||||||| || |||||||| ||| Sbjct 78167 TCAGAAAGAAAGCACCCTTCACCTCGTT 78194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181810306539253