Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Perkinsela_20sp._20CCAP_201560_2F4_20[genbank_20GCA_5F001235845.1_20 2015-08-05] 693 sequences; 9,477,801 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq237 165 1e-35 >seq237 Length=72600 Score = 165 bits (182), Expect = 1e-35 Identities = 338/496 (68%), Gaps = 16/496 (3%) Strand=Plus/Plus Query 147013 GTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTC 147072 || ||||||| |||||||| |||||||| ||||| || || ||||| || | || | Sbjct 66090 GTCAGCAGCGCATAGCTGGCAATGTTGAACGGGACGCCGAGACCCATATCGGCACTCCGC 66149 Query 147073 TGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCAC 147132 ||||| ||||| || ||||| |||| |||||||||| ||||| |||||| |||||| Sbjct 66150 TGGTAGAGCTGACAACTGAGCTTCCCGCCGGCCACGTAGAACTGCGACAGGACGTGGCAT 66209 Query 147133 GGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTG 147192 || ||||||||||| |||| | | || |||||||||| || | | | || |||| | Sbjct 66210 GGTGGCAGCGCCATCTCGGGGATGGCCACGGGGTTCCACGCACACAAGAGCATTCGCCGG 66269 Query 147193 -CTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCC 147251 | || ||| | ||| | | | |||| | || |||||||| ||||||| || Sbjct 66270 TCGCTTGGGTTGTTTCTGAGT-GCGTCGACGATTTTCCGGAGCTGGTCGACGCCCTTTCC 66328 Query 147252 CCCGTAGT--TTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCG 147309 ||| | | || |||||| ||| || || || ||||||| ||| |||||||| Sbjct 66329 AGTGTAATCATCGT--CGCAGTTGGTGTAGCTTGCGCCGAAGTGCCGCCATTGGAAGCCA 66386 Query 147310 TACACTGGCCCCAGGTCGCC----GGGCTTTCTGTGCGAGAAGCCCGCCCG-CTTGAGAA 147364 |||||||| || ||||| || | | || ||| ||||| | | ||| Sbjct 66387 TACACTGGTCCGAGGTCTCCCTCACGTCGATCGGTG-----AGCCCAAGTGAGTCGAGGT 66441 Query 147365 ACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGT 147424 | || || || | ||||||| |||| || |||| | | | || | || Sbjct 66442 ATTCTCTTGAACCATTTCCGTCCCATATGCGAACGTCCTTATCACGCAAATGGTTGGCGT 66501 Query 147425 CCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCT 147484 | ||| ||| | |||||||||| ||||| || | || || ||||| ||||| | || Sbjct 66502 CGGTGTCTCCCTGAATGAACCAGAAAAGCTCTTCGACGACGCCTCTCCAGAAGACACGCT 66561 Query 147485 TGGTGGTCAGCAGGGG 147500 |||| ||||||||||| Sbjct 66562 TGGTCGTCAGCAGGGG 66577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583482945535200