Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Perkinsela_20sp._20CCAP_201560_2F4_20[genbank_20GCA_5F001235845.1_20 2015-08-05] 693 sequences; 9,477,801 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 3e-15 >seq2 Length=132159 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 ||||| ||||| |||||||| || ||||| | || |||||||| || |||||| || Sbjct 78175 TCTTTCTGAATGTTGTAGTCTGACAGCGTGCGCCCATCCTCGAGCTGCTTTCCGGCGAAA 78116 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTT-TTCAGGGT 27175 ||||| ||||| || || || || | || || || || || ||| | || | | | Sbjct 78115 ATGAGTCGCTGCTGGTCTGGTGGGATTCCTTCCTTGTCTT-GAACTTTTGCCTTGATGTT 78057 Query 27176 TTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCAC 27235 ||| | || || | ||||| || || || || |||| ||||| ||||||||||| || Sbjct 78056 TTCAATGGTATCGTTTGCTTCCACCTCGAGTGTGATAGTCTTGCCAGTCAGAGTTTTGAC 77997 Query 27236 AAAGATTTGCAT 27247 ||||| ||||| Sbjct 77996 GAAGATCTGCAT 77985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424930811030616