Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Perkinsela_20sp._20CCAP_201560_2F4_20[genbank_20GCA_5F001235845.1_20
2015-08-05] 693 sequences; 9,477,801 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq2 158 3e-33
>seq2
Length=132159
Score = 158 bits (174), Expect = 3e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||||||||| || || || || || | ||||||||||| || ||||||||||| |
Sbjct 77983 CCACCACGCAGCCGCAGAACGAGGTGAAGGGTGCTTTCTTTCTGAATGTTGTAGTCTGAC 77924
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|||||||| |||||||| || || || ||||| || || | || || ||||| ||
Sbjct 77923 AGCGTGCGCCCATCCTCGAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCTGGTGGG 77864
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| || ||||||||||| | ||||| || | | | || || || || ||||| ||
Sbjct 77863 ATTCCTTCCTTGTCTTGAACTTTTGCCTTGATGTTTTCAATGGTATCGTTTGCTTCCACC 77804
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| |||||||| |||||||| || ||||| ||||||||
Sbjct 77803 TCAAGGGTGATGGTCTTACCAGTCAAAGTTTTGACGAAGATCTGCAT 77757
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| || ||||| ||||| || || || | ||||||||||| || ||||||||||| |
Sbjct 78211 CCTCCTCGCAGCCGAAGAACGAGGTGAAGGGTGCTTTCTTTCTGAATGTTGTAGTCTGAC 78152
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|||||||| |||||||| || || || ||||| || || | || || ||||| ||
Sbjct 78151 AGCGTGCGCCCATCCTCGAGCTGCTTTCCGGCGAAAATGAGTCGCTGCTGGTCTGGTGGG 78092
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| || ||||||||||| | ||||| || | | | || || || || ||||| ||
Sbjct 78091 ATTCCTTCCTTGTCTTGAACTTTTGCCTTGATGTTTTCAATGGTATCGTTTGCTTCCACC 78032
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || |||| ||| || ||||| ||||||||
Sbjct 78031 TCGAGTGTGATAGTCTTGCCAGTCAGAGTTTTGACGAAGATCTGCAT 77985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046729905937222
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |