Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq11 150 4e-31 >seq11 Length=2034363 Score = 150 bits (166), Expect = 4e-31 Identities = 185/253 (73%), Gaps = 0/253 (0%) Strand=Plus/Plus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 ||||| || || || || || | ||| | |||||||| || ||||| | ||| || Sbjct 1273240 ATCATCACGGATGCGGTGGACATCGAGCACGAGTTCATCTGCGACGCACTGCCAGTGCGG 1273299 Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || || || |||||| | || || ||||| ||||||||||| || || || |||||| | Sbjct 1273300 CTGATCGGGATGAACTCGGAGCTGATGGGGCAGTACATCGAGTTTGTTGCGGACCGCCTG 1273359 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | ||||| ||||| | ||||| |||||||| ||| || || | || |||||| Sbjct 1273360 CTCGTTGCGCTTGGGGAGGAGAAGCACTACAACTCGGCGAATCCATTCGACTTCATGGAG 1273419 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 | || ||||| || || ||||||||||||||||| ||| || | || ||||||| | Sbjct 1273420 ATGATCTCGCTGCAGGGCAAGACCAACTTCTTCGAGAAGAAGGTTGGCGAGTATCAGAAG 1273479 Query 230626 CCTGGTGTGATGA 230638 |||||||||||| Sbjct 1273480 GCTGGTGTGATGA 1273492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057822698876480