Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq11 141 1e-28 >seq11 Length=2034363 Score = 141 bits (156), Expect = 1e-28 Identities = 422/641 (66%), Gaps = 30/641 (5%) Strand=Plus/Minus Query 145648 GGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAG 145707 ||||| ||||| || ||| | || || |||||| | | |||||||| |||| Sbjct 206645 GGAAAAGGCCGAGGAGTCCGTTTGAGTTGCTCCTTCAGCGCTGCAACGTGGTTTTTGTAG 206586 Query 145708 ACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCG 145767 | ||||| ||||| ||| ||||| || || ||||||| | ||||| | ||| Sbjct 206585 ATATGCGCATCCCCGAGGGTGTGGACGAGCTCTCCGGGCTTTAACCCCGTCGCCTTCGCG 206526 Query 145768 ACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCC 145827 | || |||| |||| |||| ||| ||||| || ||||| || || ||||| || Sbjct 206525 ATCAGAATTGTCAAAAGGGCGTAGGAGGCGATGTTAAAAGGCACGCCAAGTCCCATATCG 206466 Query 145828 CCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCC----CCGCCCG--CCACGTAGAACTGG 145881 | ||||||||||| ||| || ||||||||| |||| | |||||||||||| Sbjct 206465 CAGGAGCGCTGGTAGAGCATACACGAGAGCTCCTTCGTCGCCGGGTTCACGTAGAACTGT 206406 Query 145882 CACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTG 145941 | || || ||||||||||| || ||||| |||| | | ||| ||||| || Sbjct 206405 CCGAGAAGATGGCAGGGCGGGAGTGCCATTTTATGCAGAGCGGACGGATTCCACGC---C 206349 Query 145942 AGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGA---TCTCCCCTATCAGGTCCCTG 145995 | || |||| ||| | ||| || || |||||| ||||| | || || | || Sbjct 206348 ACGAAGAGCATCCGCCGGTCGTTTGGATTTGTCTTGAGGGTCTCCACGAT---GTACTTG 206292 Query 145996 AGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAG 146055 | |||||||||||||| ||| ||| | | | || | |||| | || ||||| Sbjct 206291 ATCTGGTCCACGCCCTTCCCGTCGTAGTTCGCGCGGTGGTTCGTGTACTCCGCACCGAAA 206232 Query 146056 TGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCC---CAGC 146112 |||| |||||| || ||||| || || || || ||| |||| || | | || Sbjct 206231 TGCCGCCACTGAAAGCCGTAAACCGGGCCGAGATCC---ATCTCCTCGTTCTCGTGCAAT 206175 Query 146113 CCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCG 146170 ||| | | | || || | ||||| |||||| | |||||||| | || || ||| Sbjct 206174 CCGCGGCTGTCAAGAAAAGCGCGGGAGCCGTTGTCATCCCAGATATGAACCCCTTTATCG 206115 Query 146171 CGGAG-AGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACC 146229 | || ||| | | | || || || | | ||||| |||||||| ||| || Sbjct 206114 CTTAGCAGC-CGT--GCGTTTGTCTCGCCGCGCAAAAACCACAGCAGCTCCTCGGAAACA 206058 Query 146230 CCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAACTG 146270 || | ||| ||||| | |||||||| |||| ||| | ||| Sbjct 206057 CCACGCCAAAAGACGCGTTTGGTGGTGAGCAAGGGAAGCTG 206017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076091907840