Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq11 132 4e-26 >seq11 Length=2034363 Score = 132 bits (146), Expect = 4e-26 Identities = 276/407 (68%), Gaps = 8/407 (2%) Strand=Plus/Minus Query 20932 CAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCA 20991 |||||||||| ||||| | || || || || | |||||| || | ||||| || | | Sbjct 206602 CAACGTGGTTTTTGTAGATATGCGCATCCCCGAGGGTGTGGACGAGCTCTCCGGGCTTTA 206543 Query 20992 GGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGA 21051 ||||| | | ||||||||| |||| ||||||||| |||||||||||| || | Sbjct 206542 ACCCCGTCGCCTTCGCGATCAGAATTGTCAAAAGGGCGTAGGAGGCGATGTTAAAAGGCA 206483 Query 21052 CCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCC-----CCCCG 21106 | || || ||||| ||| ||| | |||||| ||| || || |||||| | ||| Sbjct 206482 CGCCAAGTCCCATATCGCAGGAGCGCTGGTAGAGCATACACGAGAGCTCCTTCGTCGCCG 206423 Query 21107 AG-CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCG 21165 | |||||| ||||| | | || || || || ||||| ||||| || | | Sbjct 206422 GGTTCACGTAGAACTGTCCGAGAAGATGGCAGGGCGGGAGTGCCATTTTATGCAGAGCGG 206363 Query 21166 CGGGGTTCCACGCGCAC-ATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATCC 21224 || |||||||| ||| | | || ||||| |||| || | || | ||| Sbjct 206362 ACGGATTCCACGC-CACGAAGAGCATCCGCCGGTCGTTTGGATTTGTCTTGAGGGTCTCC 206304 Query 21225 ACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTAC 21284 || | ||| | ||||||||| |||| || |||||||| ||| | | ||||| Sbjct 206303 ACGATGTACTTGATCTGGTCCACGCCCTTCCCGTCGTAGTTCGCGCGGTGGTTCGTGTAC 206244 Query 21285 TCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATC 21331 ||||| || ||||| | |||||| || ||||| ||||| || ||||| Sbjct 206243 TCCGCACCGAAATGCCGCCACTGAAAGCCGTAAACCGGGCCGAGATC 206197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775499502080