Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq96 96.9 5e-15 >seq96 Length=723174 Score = 96.9 bits (106), Expect = 5e-15 Identities = 249/374 (67%), Gaps = 4/374 (1%) Strand=Plus/Plus Query 72009 TCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGAT 72067 ||| || || ||||| || ||||| |||||||| || |||||||| || || || |||| Sbjct 451054 TCCTTCTTCTTTTACACGCTTCATGAAGAGATCGGGTATCCAAAG-GCCGTAGAAGAGAT 451112 Query 72068 CTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAG-ATCGAGGAACGCCATAATA 72126 | | | | || || || || || ||||| || || ||| || ||| | | ||| Sbjct 451113 CCCGCGCACGTTGATCATCCTTACCCGTATTACGCTTCAGCATC-AGAAACTCGAAAATG 451171 Query 72127 TCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGA 72186 |||| ||||| || |||| || | || | | ||| || || || |||||| Sbjct 451172 TCAGCGTGCCAGGGCTCCAGATAGACCGCAAAGGCACCCTTGCGCTTACCGCCACCCTGA 451231 Query 72187 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCA 72246 || | ||| | |||||||| || | || | || ||| || | | ||| ||||| | Sbjct 451232 TCAACGTAGCGGGCGGTGTTGTTGAACACGCGCAGCATGGGCACGAGACCGTTGGAAGTC 451291 Query 72247 CCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATT 72306 ||||| || || | |||||||||||| || ||| || ||| || || || || Sbjct 451292 CCATTTGTGCCAGCAATATAGCTTCCAGAGGAACGGATGTTGTGAACGTGCAGCCCAATC 451351 Query 72307 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATA 72366 || || || ||| ||| | ||||| || | || || ||||||||||| || Sbjct 451352 CCACCGGCTGACTTACTGATCACGGCGCACTCCTTCAGGGTGTCGTAGATGCCCTCAATG 451411 Query 72367 CTATCATCCATCAT 72380 ||||| ||| |||| Sbjct 451412 CTATCCTCCTTCAT 451425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138394632960