Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq88 82.4 6e-11 >seq88 Length=784127 Score = 82.4 bits (90), Expect = 6e-11 Identities = 150/219 (68%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891 ||||| ||||| ||| |||||||| || || ||||| ||||| | || | | ||||| Sbjct 683011 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTC 682952 Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951 |||||| || |||||| | || || | |||||| ||| || | |||||| ||||| Sbjct 682951 CAGCTGCTTGCCCGCAAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 682892 Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011 || ||| || || | ||| || |||| | |||| |||| | || || || Sbjct 682891 GATCTTCGCCTTCACGTTATCGATCGTGTCGCTGGCCTCCACCTCGAGCGCGATCGTCTT 682832 Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT--TTTAAAT 19048 || || | || || || || || ||||| ||||||| Sbjct 682831 GCCCGTCAGCGTCTTCACGAAGATCTGCATCCTTTAAAT 682793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414572314949824