Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq11 105 5e-18 >seq11 Length=2034363 Score = 105 bits (116), Expect = 5e-18 Identities = 362/554 (65%), Gaps = 19/554 (3%) Strand=Plus/Minus Query 25421 CTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTC 25480 |||||||| | | ||||| | ||||| || || || || || |||||||| | ||| Sbjct 206613 CTTCAGCGCTGCAACGTGGTTTTTGTAGATATGCGCATCCCCGAGGGTGTGGACGAGCTC 206554 Query 25481 TCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGAT 25540 ||| || | || ||| || | | || |||| || | || |||| |||||| Sbjct 206553 TCCGGGCTTTAACCCCGTCGCCTTCGCGATCAGAATTGTCAAAAGGGCGTAGGAGGCGAT 206494 Query 25541 GTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT 25600 |||||| || || || | ||||| || | || | |||||||||| ||||||||||| Sbjct 206493 GTTAAAAGGCACGCCAAGTCCCATATCGCAG-GAGCGCTGGTAGAGCATACACGAGAGCT 206435 Query 25601 -CTTCGTCGC-----TCACGTAAAACTGAC--ACATGGTGTAGCACGGAGGAAGAGCTAT 25652 ||||||||| ||||||| ||||| | | | | || ||| || || || || || Sbjct 206434 CCTTCGTCGCCGGGTTCACGTAGAACTGTCCGAGAAGATG--GCAGGGCGGGAGTGCCAT 206377 Query 25653 AAGGCCCAAGTCTTTAGGGTTCCAGGCGCAC-ACGATGATGCACCTGTCTTCTGGGTTGT 25711 || | || ||||| || ||| | || || | || ||| | ||| || Sbjct 206376 TTTATGCAGAGCGGACGGATTCCACGC-CACGAAGAGCATCCGCCGGTCGTTTGGATTTG 206318 Query 25712 CCCTGATAAGATCCGCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCC 25771 | ||| ||| || ||| | | ||| ||||| ||| |||| ||||| || | Sbjct 206317 TCTTGAGGGTCTCCACGATGTACTTGATCTGGTCCACGCCCTTCCCGTCGTAGTTCGCGC 206258 Query 25772 TCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGT 25831 || ||||||||| || ||||||| || |||||| || ||||| ||||| || || Sbjct 206257 GGTGGTTCGTGTACTCCGCACCGAAATGCCGCCACTGAAAGCCGTAAACCGGGCCGAG-- 206200 Query 25832 CTCCATCTTCCCTGTGCTC---AAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGG 25888 |||||| ||| || ||| || || | | || | ||| | | ||| || ||| Sbjct 206199 ATCCATC-TCCTCGTTCTCGTGCAATCCGCGGCTGTCAAGAAAAGCGCGGGAGCCGTTGT 206141 Query 25889 CGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGA 25948 | |||||||| | ||||| || ||| ||| | |||||| || | | | Sbjct 206140 CATCCCAGATATGAACCCCTTTATCGCTTAGCAGCCGTGCGTTTGTCTCGCCGCGCAAAA 206081 Query 25949 ACCACAGCAGCTCC 25962 |||||||||||||| Sbjct 206080 ACCACAGCAGCTCC 206067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340137202039008