Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq96 199 1e-45 >seq96 Length=723174 Score = 199 bits (220), Expect = 1e-45 Identities = 524/786 (67%), Gaps = 14/786 (2%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| |||||||| || || | | ||| ||||| || | || || ||| || Sbjct 451500 TTCACCCACGCCACACCGACGCTCTTCAACGCTGGCACGCCACGGCCCCAAATGAGCTCG 451441 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 |||||||| || |||||||| ||| ||| ||||| |||| ||||| || ||| | Sbjct 451440 TGCTTTCTCATAGCTATGAAGGAGGATAGCATTGAGGGCATCTACGACACCCTGAAGGAG 451381 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTG 363724 || || | || ||| || || || ||||| || | || || |||| | ||| Sbjct 451380 TGCGCCGTGATCAGTAAGTCAGCCGGTGGGATTGGGCTGCA-CGTTC-ACAACATCCGTT 451323 Query 363725 CA-CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 | | | | || || ||| |||||| || || || || || || |||||||| Sbjct 451322 CCTCTGGA-AGCTATATTGCTGGCACAAATGGGACTTCCAACGGTCTCGTGCCCATGCTG 451264 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 || ||||| |||| || || | ||||| || |||||||| || |||||||| || || Sbjct 451263 CGCGTGTTCAACAACACCGCCCGCTACGTTGATCAGGGTGGCGGTAAGCGCAAGGGTGCC 451204 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903 ||||| | ||||| ||||| || || || ||||| |||||||| ||| | Sbjct 451203 TTTGCGGTCTATCTGGAGCCCTGGCACGCTGACATTTTCGAGTTTCTGATGCTGAAGCGT 451144 Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 || ||||| || || || ||||| || ||||| ||||| | |||||| | | || Sbjct 451143 AATACGGGTAAGGATGATCAACGTGCGCGGGATCTCTTCTACGGCCTTTGGATACCCGAT 451084 Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAGAAT-TGGTCACTCTTT--TGCCCACACGAA 364020 | || |||||||| || | | || | ||| ||| | || | | |||||| | Sbjct 451083 CTCTTCATGAAGCGTGTAAAAGAAGA-AGGAAGCTGGACGCTAATGGATCCCCACATG-- 451027 Query 364021 TGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAA 364080 || || |||||| |||| | || || || | || | | || | | || ||| Sbjct 451026 TGCCCGGGTCTTAGCGATTGCTATGGAGAGGAGTTTGAATCCTTGTATGTGAGCTACGAA 450967 Query 364081 TCGGAGGGAAAGGCTCGTAAG-ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGA 364139 | | |||| || | || || || || ||| |||| |||||| | ||| | || Sbjct 450966 ACACAAAAGAAGGGG-GTGCGCACGATCCCAGCGCAGGAGCTGTGGTTTACTATCTTAGA 450908 Query 364140 TTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTC 364199 | ||||||||||| || || | ||| |||| |||||| |||||||| | ||||| Sbjct 450907 GACCCAGATTGAGACGGGTGTTCCTTTCATGCTGTATAAAGATGCGTGCAACAGGAAGTC 450848 Query 364200 CAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATA 364259 ||||| ||||| | || || ||| | ||| ||||| || || |||||||| || Sbjct 450847 AAACCAAAAGCACATCGGCACGATTAAATGCTCCAATCTATGCACAGAAATTATTGAGTA 450788 Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 ||| | ||||| ||||| || || || ||| | ||||| ||||| |||||| |||||| Sbjct 450787 CACGTCCCCCGAGGAGACGGCGGTCTGCAACTTGGCGTCTATCGCCCTTCCGCGGTTTGT 450728 Query 364320 AAAAGA 364325 || || Sbjct 450727 GAACGA 450722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351996875072