Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq11 165 2e-35 >seq11 Length=2034363 Score = 165 bits (182), Expect = 2e-35 Identities = 523/798 (66%), Gaps = 22/798 (3%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||||| ||| ||||| | ||||||||||||||| || || | Sbjct 1273454 TCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATCATCTCCATGAAGTCGAATGGATTCGCC 1273395 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | ||||| ||||| | ||||| || |||| | |||||| || |||||||| | Sbjct 1273394 GAGTTGTAGTGCTTCTCCTCCCCAAGCGCAACGAGCAGGCGGTCCGCAACAAACTCGATG 1273335 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| |||||||| || |||||||| || |||| || || | ||| || |||||| Sbjct 1273334 TACTGCCCCATCAGCTCCGAGTTCATCCCGATCAGCCGCACTGGCAGTGCGTCGCAGATG 1273275 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAGC 251802 || || | ||| || | || || ||| | || || ||| | | | | | |||| Sbjct 1273274 AACTCGTGCTCGATGTCCACCGCATCCGTGATGATCTCCAGCACGCGCGACCGCGGCAGC 1273215 Query 251803 TTGTTCTCCA---GCTTTGAGTACAGGA-GCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858 |||| || | | | |||||| | || || |||| | |||||| |||||||| Sbjct 1273214 TTGTGCTTAATGTGGCGCGTGTACAGCAGGCACG-CAAAGTCCGTGTGCAGGCCCTCGTC 1273156 Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918 ||| ||| | ||||||| | || || |||||||| || || ||| | ||||| Sbjct 1273155 GCGCGAGATCAGCTCGTTGCTGAAGGTTAGCCCGGGCATCACGCCGCGCTTCTTAAGCCA 1273096 Query 251919 GAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAG 251978 ||| | ||||||||| || || || || | | ||||||||| | | || || || Sbjct 1273095 GAACAGTGCGCAAAATGACCCTGAAAAGAAGATGCCCTCGACAGCTGCAAACGCGACCAG 1273036 Query 251979 GCGCT-CAGCAAAC-GACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTTCTTT 252036 |||| | | || | ||| | | || | || | ||||| || ||||||||| Sbjct 1273035 ACGCTCCTGGAAGCTGACCTCGCTCCCG--ATCCACCGCACCGCCCACGCAGCCTTCTTT 1272978 Query 252037 CCAACCGCGGGGATTGTTTCGATTGCAT----CAAAGAGAGAGTTCCGCTCGGCATCGTC 252092 | || || || | ||| |||| || ||| || || || ||| Sbjct 1272977 TGGATGCATGGAATCGTCTGGATCGCATGTAGCATGCGGAGCTTT----TCCTCAGTGTC 1272922 Query 252093 CTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACAT 252152 | |||| | || |||| | |||||| |||||| ||||| || | | || Sbjct 1272921 CATGATGTATGTGTCCAGCATCACCGAGTACGCCTCCGAGTGGATATTCTCCATCATCAG 1272862 Query 252153 CTGGTAAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTCCGTGGAAAAGTTGTTTGC 252212 ||| | ||||||| |||||| || | || || || ||| | ||| Sbjct 1272861 CTGAAACCCATAGAACGCACGCGCCTCCGGTATCTTCACGTCGGTCATGAAGCGCTGTGC 1272802 Query 252213 AATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGATGAA 252272 | |||||| ||||| ||||| ||||| || || |||||| | || | | ||||||||| Sbjct 1272801 GAGGTTCTCGATCACGATGCCGTCGCTTCCCGCGAAGAAGGCGAGCACGTGCTTGATGAA 1272742 Query 252273 GTGACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTC-CTGATTCAGAGGAA 252331 ||| ||||| | ||||| |||| |||| ||| || | ||||| ||| ||| | Sbjct 1272741 GTGTCGCTCCCCATCGTTCAGCT--TCAC-CCAATCCACCATGTCACTG-CCCAGGTCGA 1272686 Query 252332 CTTCTTCCACCGTCCAGA 252349 || ||||||||||||| Sbjct 1272685 TCTCCTCCACCGTCCAGA 1272668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835535760736