Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq11 149 1e-30 >seq11 Length=2034363 Score = 149 bits (164), Expect = 1e-30 Identities = 190/262 (73%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| || || || || | ||| | || ||||| |||||||| | ||| ||| Sbjct 1273240 ATCATCACGGATGCGGTGGACATCGAGCACGAGTTCATCTGCGACGCACTGCCAGTGCGG 1273299 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || || || |||||||| || || ||||| ||||||||||| || || || |||||| | Sbjct 1273300 CTGATCGGGATGAACTCGGAGCTGATGGGGCAGTACATCGAGTTTGTTGCGGACCGCCTG 1273359 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || | |||||||| | ||||| |||||||| ||| || || | ||| |||||| Sbjct 1273360 CTCGTTGCGCTTGGGGAGGAGAAGCACTACAACTCGGCGAATCCATTCGACTTCATGGAG 1273419 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 | || ||||| || || || || ||||||||||| ||| || | || ||||| Sbjct 1273420 ATGATCTCGCTGCAGGGCAAGACCAACTTCTTCGAGAAGAAGGTTGGCGAGTATCAGAAG 1273479 Query 243742 CCTGGTGTGATGAAACCAGAGG 243763 |||||||||||| |||||| Sbjct 1273480 GCTGGTGTGATGAGCACAGAGG 1273501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878643457600