Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq96 138 1e-27 >seq96 Length=723174 Score = 138 bits (152), Expect = 1e-27 Identities = 223/321 (69%), Gaps = 0/321 (0%) Strand=Plus/Minus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||||| ||||| || |||||||| || || || ||| || ||| ||||| || || Sbjct 451491 GCCACACCGACGCTCTTCAACGCTGGCACGCCACGGCCCCAAATGAGCTCGTGCTTTCTC 451432 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 || | | |||| || ||| || || | ||||| ||| ||||| || || Sbjct 451431 ATAGCTATGAAGGAGGATAGCATTGAGGGCATCTACGACACCCTGAAGGAGTGCGCCGTG 451372 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||| || | || || || || ||| | || ||| || | ||| || || | Sbjct 451371 ATCAGTAAGTCAGCCGGTGGGATTGGGCTGCACGTTCACAACATCCGTTCCTCTGGAAGC 451312 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 || || || || ||||| || |||||||| ||||| || ||||| || || |||||| Sbjct 451311 TATATTGCTGGCACAAATGGGACTTCCAACGGTCTCGTGCCCATGCTGCGCGTGTTCAAC 451252 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || |||||||| || |||||||| || | | | |||||| | || ||||||||| Sbjct 451251 AACACCGCCCGCTACGTTGATCAGGGTGGCGGTAAGCGCAAGGGTGCCTTTGCGGTCTAT 451192 Query 94192 CTCGAGCCCTGGCACGCGGAC 94212 || |||||||||||||| ||| Sbjct 451191 CTGGAGCCCTGGCACGCTGAC 451171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722606332160