Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq96 154 2e-32 >seq96 Length=723174 Score = 154 bits (170), Expect = 2e-32 Identities = 634/989 (64%), Gaps = 13/989 (1%) Strand=Plus/Minus Query 111689 GATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAG 111748 ||||||| || | |||| |||||| ||||| || |||||||||||||| || ||| | Sbjct 451516 GATGTCCAAGGGATTCTTCACCCACGCCACACCGACGCTCTTCAACGCTGGCACGCCACG 451457 Query 111749 ACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTA 111808 ||||||||| | || || || || || | ||||||||| || | ||||| || Sbjct 451456 GCCCCAAATGAGCTCGTGCTTTCTCATAGCTATGAAGGAGGATAGCATTGAGGGCATCTA 451397 Query 111809 CGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACAT 111868 || ||| || | || || ||| ||| |||| || ||||| || ||| ||||| | Sbjct 451396 CGACACCCTGAAGGAGTGCGCCGTGATCAGTAAGTCAGCCGGTGGGATTGGGCTGCACGT 451337 Query 111869 CCATGATGTCAGAGC--CAACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGT 111926 || | || | | | ||| || |||| || |||||||| || | ||| Sbjct 451336 TCACAACATCCGTTCCTCTGGAAG-CT-ATATTGCTGGCACAAATGGGACTTCCAACGGT 451279 Query 111927 ATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGT 111986 | | || ||||| ||||| || ||| ||| || ||||| || | || | ||| || Sbjct 451278 CTCGTGCCCATGCTGCGCGTGTTCAACAACACCGCCCGCTACGTTGATCAGGGTGGCGGT 451219 Query 111987 ---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTC 112043 |||||||| | | || |||||||| ||||| |||||||| || || | ||||| Sbjct 451218 AAGCGCAAGGGTGCCTTTGCGGTCTATCTGGAGCCCTGGCACGCTGACATTTTCGAGTTT 451159 Query 112044 CTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGC 112102 || | || | || ||| | || || | |||| || |||||||||| || Sbjct 451158 CTGATGCTGAAGCGTAATACGGGTAAGGATGA-TCAACGTGCGCGGGATCTCTTCTACGG 451100 Query 112103 TCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTT 112162 || ||||| || ||||||||||||||| | || | || || | ||| | || | Sbjct 451099 CCTTTGGATACCCGATCTCTTCATGAAGCGTGTAAAAGAAGAAGGAAGCTGGACGCTAAT 451040 Query 112163 TTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTA 112222 ||| ||| | || ||||| |||| | || |||||||||||| || | || Sbjct 451039 GGATCCCCACATGTGCCCGGGTCTTAGCGATTGCTATGGAGAGGAGTTTGAATCCTTGTA 450980 Query 112223 CACAAAGTACG-AGGAAGAAAGTCGGGCGACTGCG-ACGGTGCCAGCTGCCGATGTGTGG 112280 | |||| | | |||| ||| | |||| ||| | ||||| || ||||| Sbjct 450979 TGTGAGCTACGAAACACAAAAGAAGGGGG--TGCGCACGATCCCAGCGCAGGAGCTGTGG 450922 Query 112281 AAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCC 112340 |||| | || | || | ||||| ||| || | ||||| || ||||| || Sbjct 450921 TTTACTATCTTAGAGACCCAGATTGAGACGGGTGTTCCTTTCATGCTGTATAAAGATGCG 450862 Query 112341 TGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACA 112400 || ||| ||| || |||||| | | || ||| || | ||||| || || ||| Sbjct 450861 TGCAACAGGAAGTCAAACCAAAAGCACATCGGCACGATTAAATGCTCCAATCTATGCACA 450802 Query 112401 GAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCT 112460 ||||| | || | || | || |||||||| || || ||| | || || ||||| Sbjct 450801 GAAATTATTGAGTACACGTCCCCCGAGGAGACGGCGGTCTGCAACTTGGCGTCTATCGCC 450742 Query 112461 CTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTT 112520 || || || |||| | |||| | ||||| ||||| | || ||| | || || Sbjct 450741 CTTCCGCGGTTTGTGAACGAAGAGGCGAAGACCTTTGACCACAAATTGCTCTATGAGGTC 450682 Query 112521 ACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAG 112580 |||||| || || | ||||| ||| | || || || | | || || || ||| Sbjct 450681 ACGAAAGAAGTAACCTACAACCTGAACCGCGTGATCGACAACTCCTACTATCCGGTAGAG 450622 Query 112581 ACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCG 112640 || || || | || | | | ||||| ||||| | || ||||||| || || Sbjct 450621 ACAGCACGAAGGAGCAACACTAATTATCGTCCCATTGGCTTGGGCATCCAAGGCCTTGCA 450562 Query 112641 GATGTATTCATTCTTTGTCGCCACGCATT 112669 ||| || ||||||| || || |||| Sbjct 450561 GATACTTTTATTCTTTTACGTCAGACATT 450533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741655109120