Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq11 87.8 1e-11 >seq11 Length=2034363 Score = 87.8 bits (96), Expect = 1e-11 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 817094 TTAATAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCT 817153 ||| | || ||||| ||||| ||| | || |||||||||||| | || ||||| |||| Sbjct 548329 TTAGTGGACTTTTCTTCTCCCAATGTCGCGAAGGAAATGCATGTCGGTCACTTACGATCC 548388 Query 817154 ACAATAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGA 817213 || || |||||||||||| | || | | | |||||| || | ||| || | || Sbjct 548389 ACTATTATTGGTGAATCTTTGTGCCGTCTCTTTGAATTCTGCAACTTTGATGTGCTTCGA 548448 Query 817214 ATAAATCATATTGGTGATTGGGGAAC 817239 || || |||||||| || |||||||| Sbjct 548449 ATCAACCATATTGGAGACTGGGGAAC 548474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268175082094208