Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq33 295 9e-75 >seq33 Length=1536331 Score = 295 bits (326), Expect = 9e-75 Identities = 1022/1580 (65%), Gaps = 26/1580 (2%) Strand=Plus/Plus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 |||||||||||| || | || || || ||||| || |||||||| ||||| || || || Sbjct 973353 AGCTATTGGTATTGACCTGGGCACGACATACTCGTGCGTTGGTGTGTGGCAGAACGAACG 973412 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 || ||||| ||| |||| || || || ||||| || || ||||| || || ||||| || Sbjct 973413 CGTGGAGATCATCGCGAACGATCAGGGCAACCGGACGACGCCATCCTATGTGGCCTTCAC 973472 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 || ||||| | || | || || || || || || ||| || |||||||| || Sbjct 973473 CGACAATGAGAGGCTGATCGGTGACGCTGCGAAGAACCAGGTTGCGATGAACCCGCAAAA 973532 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 || ||||| ||||||||||| || || || || ||| || || || || Sbjct 973533 CACCGTCTTCGACGCGAAGCGCCTGATCGGGCGGCGGTTCAGCGACCAGTTGGTGCAGCT 973592 Query 195538 CGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAA 195597 ||| || ||| ||||| | | | | || || | | || || ||||| |||| | Sbjct 973593 CGACATGAAGCACTGGCCGTTTAAGGTGGTGACGAAGGGGGACGACAAGCCGCTGATCCA 973652 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 |||| || | ||| ||| |||| || | || || || || || |||||| | Sbjct 973653 GGTTGGCTTCCGCGGCGAGGAGAAGACGTTCACGCCGGAGGAGATCAGCTCGATGGTGCT 973712 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | | |||||||||||||| ||||| || | | | || || ||||| | || || | Sbjct 973713 GCTGAAGATGAAGGAGACGGCGGAGTCGTACCTCGGGAAGCAGGTGAAGAAGGCGGTGAT 973772 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 || || ||||| ||||| | || || || || ||||| || |||||||| | | || Sbjct 973773 CACGGTGCCTGCGTACTTTAACGACTCGCAGCGCCAGGCCACCAAGGACGCGGGCGTGAT 973832 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 || || || | || | || ||||| || || || || || || || || || || Sbjct 973833 AGCCGGGCTCGAGGTGCTGCGCATCATCAACGAGCCGACGGCTGCGGCCATCGCGTACGG 973892 Query 195838 TCTGGACAAGAACAAGGA---CGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGG 195894 ||| ||||||| || ||| | | || || || | ||||| || ||||| || || Sbjct 973893 TCTCGACAAGAGCACGGAGAGCCAGGAGCGGAACGTCCTCATCTTCGACCTCGGCGGCGG 973952 Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954 ||||| |||||| | || || | || || || || || ||||| || ||||| || || Sbjct 973953 CACGTTCGATGTCACGCTGCTGACGATCGACGGCGGCATCTTCGAGGTGAAGGCCACCGC 974012 Query 195955 TGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCT--TCTCCGTCATTTGTCT 196012 || || || || || || || || || |||| || || | | || || Sbjct 974013 CGGCGACACCCACCTCGGCGGCGAGGACCTCGACAACCGCCTGGTGAACTTC--TTCAGC 974070 Query 196013 GATGAGTTCCGTCGAAAGAA---TAAGAAAGATATTTCTGGAAATCCTAGGGCT--CTTC 196067 || |||||| || ||||| | || || | || | | | || ||| || | Sbjct 974071 GACGAGTTCAAGCGCAAGAACCGTGGCAAGGACCTGTCCGCGA--GCCAGCGCTCGCTGC 974128 Query 196068 GTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAA 196127 | || || | || || || || || ||||| || || || || || || | || | | Sbjct 974129 GCCGTCTGCGCACCGCGTGCGAGCGCGCCAAGCGCACCCTGTCCTCCGCGACGCAGGCCA 974188 Query 196128 TGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTA-TACAACTATTACCCGTGCA 196186 | ||||| || || | || ||| | || |||||| | | |||| || |||||||| Sbjct 974189 CCATCGAGATCGACGCGCTCTTCGACAGCATCGACTTCCAGTCCAAC-ATCACCCGTGCC 974247 Query 196187 CGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTA 196246 || || || ||| | | || | || | ||| || || || || || | || Sbjct 974248 CGCTTCGAGGAGCTGTGCAGCGACCTCTTCCGCAAGACCATCGAGCCCGTCGAGCGCGTC 974307 Query 196247 CTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCA 196306 || | ||| | |||||||| ||| ||| | || | || || || || || || Sbjct 974308 CTCCAGGACTCCAAGATGGACAAGCGCGCGGTGCACGAGGTCGTGCTCGTCGGCGGCTCC 974367 Query 196307 ACCCGTATTCCGAAGATTCAACAGATGCTT-TCT---AGCTTCTTCAATAATAAAGATTT 196362 || |||||||| ||| | ||| |||| ||| || |||||| || || | Sbjct 974368 ACGCGTATTCCCAAGGT---GCAGGCGCTTGTCTCCGAG-TTCTTCGGCGGCAAGGAGCT 974423 Query 196363 AAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTAT 196422 ||||| | |||||||| || || || ||||| || || |||||||| ||||| || Sbjct 974424 GAACAAGAGCATCAACCCCGACGAGGCCGTTGCGTACGGCGCGGCCGTGCAGGCGTTCAT 974483 Query 196423 TCTCTCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGT 196482 || | || | | | || | | | || ||||| || || || | || | Sbjct 974484 CCTGACCGGCGGCAAGAGCAAGCAGACGGAGGGCCTGCTGCTGCTGGACGTGACCCCGCT 974543 Query 196483 ATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAAC 196542 | || || | || || || || || || ||||| | || | | ||||| || Sbjct 974544 CACGCTCGGCATCGAGACGGCCGGCGGCGTCATGACGGCGCTCATCAAGCGCAACACGAC 974603 Query 196543 TATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCA 196602 || ||||| |||||| || ||||| || ||||| | || || ||||| || || || Sbjct 974604 GATCCCGACGAAGAAGAGCCAGGTCTTCTCGACGTACGCGGACAACCAACCCGGCGTGCA 974663 Query 196603 TATTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTT 196661 || ||||| | || || || || | || || | ||||| ||| || || || || | Sbjct 974664 CATCCAAGTCTTCGAGGGCGAGCG-TGCCATGACGAAGGACTGCCACCTGCTCGGCACCT 974722 Query 196662 TCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCG 196721 |||| || ||||||| || | || || | ||||| || ||||| | || ||||| Sbjct 974723 TCGACCTGTCGGGGATCCCCCCGGCGCCGCGCGGTGTGCCGCAGATCGAGGTCACCTTCG 974782 Query 196722 ATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTG 196781 | | ||||| || || || || ||||| || || |||||||||| | ||||| Sbjct 974783 ACGTGGACGCCAACGGCATCCTGAACGTGACGGCCGAGGACAAGGGCACCGGCAAGCGCA 974842 Query 196782 AAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGG 196841 | |||| || ||||| |||||||| || || |||| ||| || || || |||| Sbjct 974843 ACCAGATCACCATCACCAACGACAAGGGCCGTCTCAGCAAGGCGGAGATCGAGCGGATGG 974902 Query 196842 TTCAAGATGCGGAAAAGTAC 196861 | | || || | |||||| Sbjct 974903 TCAACGACGCCGGCAAGTAC 974922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861610565120