Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq96 127 6e-24 >seq96 Length=723174 Score = 127 bits (140), Expect = 6e-24 Identities = 215/311 (69%), Gaps = 3/311 (1%) Strand=Plus/Plus Query 156027 GGCTCCAGATACATAGCAAAACTACCATTCCTCTT---GCCACCCTGATCTACATACCGA 156083 ||||||||||| | ||||| ||| || | ||| |||||||||||| || || || Sbjct 451184 GGCTCCAGATAGACCGCAAAGGCACCCTTGCGCTTACCGCCACCCTGATCAACGTAGCGG 451243 Query 156084 GCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCG 156143 || || || ||||| || | ||||| || | | ||| |||||||| ||||| || || Sbjct 451244 GCGGTGTTGTTGAACACGCGCAGCATGGGCACGAGACCGTTGGAAGTCCCATTTGTGCCA 451303 Query 156144 CGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT 156203 ||||| ||||| || || | || |||| || || ||||| ||||| | | Sbjct 451304 GCAATATAGCTTCCAGAGGAACGGATGTTGTGAACGTGCAGCCCAATCCCACCGGCTGAC 451363 Query 156204 TTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCC 156263 ||| || ||||| ||||| | || | | | || || ||||| ||| || | | Sbjct 451364 TTACTGATCACGGCGCACTCCTTCAGGGTGTCGTAGATGCCCTCAATGCTATCCTCCTTC 451423 Query 156264 ATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTA 156323 || | || ||| ||||||| || | ||| || ||||| || ||||||||||| || || Sbjct 451424 ATAGCTATGAGAAAGCACGAGCTCATTTGGGGCCGTGGCGTGCCAGCGTTGAAGAGCGTC 451483 Query 156324 GGTGTTGCATG 156334 ||||| || || Sbjct 451484 GGTGTGGCGTG 451494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471815789664352