Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq33 87.8 2e-12 >seq33 Length=1536331 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/142 (75%), Gaps = 3/142 (2%) Strand=Plus/Minus Query 146408 GAGCAGACCGATTACAAGCACGGGGAGCAAAA-CTTGTGCGAGACCATCATTAAGTTCGC 146466 ||||| ||| ||| | ||||||||||| || |||| |||||||| || | | || Sbjct 1075548 GAGCACTCCGCCTACCACCACGGGGAGCAGTCGCTCGTGC-AGACCATCGTTGCGATGGC 1075490 Query 146467 GCAGGATTTTGTGGGCAGCAATAATATCCCCCTTCTCTACCA-GATGGGCAATTCGGAAC 146525 |||||| ||||| |||||||| || |||||||||||| ||| ||||| || ||||| || Sbjct 1075489 GCAGGACTTTGTCGGCAGCAACAACGTCCCCCTTCTCTTCCAGGATGGTCAGTTCGGTAC 1075430 Query 146526 AAGGTTGGAAGGAGGGAAGGAC 146547 | ||| | || || || ||| Sbjct 1075429 GCGTTTGCAGGGCGGAAAAGAC 1075408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521544974145280