Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phytomonas_20francai_20[genbank_20GCA_5F001766655.1_202016-10-14] 96 sequences; 17,721,985 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq11 132 6e-26 >seq11 Length=2034363 Score = 132 bits (146), Expect = 6e-26 Identities = 389/591 (66%), Gaps = 20/591 (3%) Strand=Plus/Minus Query 146929 ACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGG 146988 |||||||| ||||| ||||| ||||| |||||||| || | || || ||||| | Sbjct 206600 ACGTGGTTTTTGTAGATATGCGCATCCCCGAGGGTGTGGACGAGCTCTCCGGGCTTTAAC 206541 Query 146989 CCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACC 147048 || ||| | | || | || || | || | |||| ||| ||||| || || || Sbjct 206540 CCCGTCGCCTTCGCGATCAGAATTGTCAAAAGGGCGTAGGAGGCGATGTTAAAAGGCACG 206481 Query 147049 CCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCC-CCGTCGGC--- 147104 || || ||||| || | || | |||||| ||| |||||||||||| ||||| | Sbjct 206480 CCAAGTCCCATATCGCAGGAGCGCTGGTAGAGCATACACGAGAGCTCCTTCGTCGCCGGG 206421 Query 147105 --CACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCG 147162 |||||| ||||| | || | ||||| ||||| || ||||| |||| | | Sbjct 206420 TTCACGTAGAACTGTCCGAGAAGATGGCAGGGCGGGAGTGCCATTTTATGCAGAGCGGAC 206361 Query 147163 GGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAA---TCTCTTCG 147219 || ||||| ||| || | || ||||| | | || || |||| | |||| || Sbjct 206360 GGATTCCACGCCACGAAGAGCATCCGCCGGTCGTTTGGATTTGTCTTGAGGGTCTCCACG 206301 Query 147220 ATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTAC 147279 || || | | |||||||||||||| || ||||||| | | | || | |||| Sbjct 206300 AT---GTACTTGATCTGGTCCACGCCCTTCCCGTCGTAGTTCGCGCGGTGGTTCGTGTAC 206244 Query 147280 CTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTC--GCCGGGCTTTC 147337 || || || |||| |||||| |||||||| || || || || || | | ||| Sbjct 206243 TCCGCACCGAAATGCCGCCACTGAAAGCCGTAAACCGGGCCGAGATCCATCTCCTCGTTC 206184 Query 147338 T-GTGCGAGAAGCC-CGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCC 147395 | |||| || || || | | | ||||| || |||| |||| | | |||||||| Sbjct 206183 TCGTGC---AATCCGCGGCTG-TCAAGAAAAGCGCGGGAGCCGTTGTCATCCCAGATATG 206128 Query 147396 CACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTC 147455 || || || || ||| | | || || ||| || | ||||| |||||||| Sbjct 206127 AACCCCTTTATCGCTTAGCAGCCGTGCGTTTGTCTCGCCGCGCAAAAACCACAGCAGCTC 206068 Query 147456 CTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAACTG 147506 ||| |||| || | ||||||||| | |||||||| |||| ||| | ||| Sbjct 206067 CTCGGAAACACCACGCCAAAAGACGCGTTTGGTGGTGAGCAAGGGAAGCTG 206017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487299814400